RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 OR10R2Q8NGX6 335 aa11.62□□□□□ -0.55
CCDC40-209ENST00000573474 LILRB1Q8NHL6 650 aaPredicted RBP11.62□□□□□ -0.55
CCDC40-209ENST00000573474 ELMOD3Q96FG2 381 aa11.62□□□□□ -0.55
CCDC40-209ENST00000573474 Q96M66 194 aa11.62□□□□□ -0.55
CCDC40-209ENST00000573474 DIRC2Q96SL1 478 aa11.62□□□□□ -0.55
CCDC40-209ENST00000573474 TLNRD1Q9H1K6 362 aa11.62□□□□□ -0.55
CCDC40-209ENST00000573474 KLF2Q9Y5W3 355 aaPredicted RBP11.62□□□□□ -0.55
CCDC40-209ENST00000573474 RELNP78509 3460 aa11.62□□□□□ -0.55
CCDC40-209ENST00000573474 ANKHD1Q8IWZ3 2542 aaKnown RBP11.62□□□□□ -0.55
CCDC40-209ENST00000573474 A0A0A6YYD4 124 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 B9A039 149 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 PRSS44E7EML9 344 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 CDIPTO14735 213 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 AKR7A2O43488 359 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 GSTZ1O43708 216 aaPredicted RBP11.61□□□□□ -0.55
CCDC40-209ENST00000573474 PTBP3O95758 552 aaKnown RBP11.61□□□□□ -0.55
CCDC40-209ENST00000573474 ADH4P08319 380 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 CPT2P23786 658 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 NPBWR2P48146 333 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 SRP9P49458 86 aaKnown RBP11.61□□□□□ -0.55
CCDC40-209ENST00000573474 MRPS10P82664 201 aaKnown RBP11.61□□□□□ -0.55
CCDC40-209ENST00000573474 DAZAP2Q15038 168 aaPredicted RBP11.61□□□□□ -0.55
CCDC40-209ENST00000573474 BAK1Q16611 211 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 MOGAT2Q3SYC2 334 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 SNX29P2Q8IUI4 249 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 C11orf53Q8IXP5 236 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 Q8IYB0 196 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 CHST4Q8NCG5 386 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 MEGF10Q96KG7 1140 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 NICN1Q9BSH3 213 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 ABCB10Q9NRK6 738 aa11.61□□□□□ -0.55
CCDC40-209ENST00000573474 PYCARD-AS1I3L0S3 204 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 M0R233 179 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 SOCS1O15524 211 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 NOS1APO75052 506 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-209ENST00000573474 RHBDL1O75783 438 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 IGHV1-46P01743 117 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 CSF3P09919 207 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 IL7P13232 177 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 FGF12P61328 243 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 TNFAIP6P98066 277 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-209ENST00000573474 IFITM3Q01628 133 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 PRAMEF6Q5VXH4 476 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 MEX3BQ6ZN04 569 aaKnown RBP11.6□□□□□ -0.55
CCDC40-209ENST00000573474 FBXL14Q8N1E6 418 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 RAB3CQ96E17 227 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 THAP7Q9BT49 309 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-209ENST00000573474 AUNIPQ9H7T9 357 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 IL19Q9UHD0 177 aa11.6□□□□□ -0.55
CCDC40-209ENST00000573474 IGHV3-64DA0A0J9YX35 117 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 ISPDA4D126 451 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A10PA6NDY2 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A18PA6NE21 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A16PA6NEW6 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A20PA6NIJ5 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A8PA6NJQ4 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A7PA6NKC0 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 A6NLC8 198 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 C17orf100A8MU93 164 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A22PA8MWA6 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A12PA8MX19 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A5PA8MXJ8 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A23PA8MXZ1 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 GABARAPH6UMI1 98 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 GOSR1O95249 250 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 CD55P08174 381 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A15PP0C7V4 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A13PP0C7W8 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A14PP0C7W9 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM90A24PP0C7X0 464 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 BLVRBP30043 206 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-209ENST00000573474 PRSS3P35030 304 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 TMEM50BP56557 158 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 RBM11P57052 281 aaKnown RBP11.59□□□□□ -0.55
CCDC40-209ENST00000573474 ERVK11-1P61568 191 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 DGCR2P98153 550 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 ARL6IP1Q15041 203 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 MST1LQ2TV78 715 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 ZNF260Q3ZCT1 412 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 CDNFQ49AH0 187 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 NHLRC3Q5JS37 347 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 TRIQKQ629K1 86 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FAM58AQ8N1B3 248 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 POC1AQ8NBT0 407 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 SMIM4Q8WVI0 70 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FCAMRQ8WWV6 532 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 ZNF488Q96MN9 340 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 OR2V2Q96R30 315 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 NRIP2Q9BQI9 281 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 FN3KRPQ9HA64 309 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 UFSP2Q9NUQ7 469 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 RBFOX1Q9NWB1 397 aaKnown RBP11.59□□□□□ -0.55
CCDC40-209ENST00000573474 C1orf123Q9NWV4 160 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 RALYQ9UKM9 306 aaKnown RBP11.59□□□□□ -0.55
CCDC40-209ENST00000573474 ST3GAL6Q9Y274 331 aa11.59□□□□□ -0.55
CCDC40-209ENST00000573474 ADGRG4Q8IZF6 3080 aa11.58□□□□□ -0.56
CCDC40-209ENST00000573474 FOXI3A8MTJ6 420 aaPredicted RBP11.58□□□□□ -0.56
CCDC40-209ENST00000573474 F8VVB4 439 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms