RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 C2orf76Q3KRA6 126 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 GTDC1Q4AE62 458 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 DEFB121Q5J5C9 76 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 TIMM23BQ5SRD1 257 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 PDZK1Q5T2W1 519 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 APOOLQ6UXV4 268 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 EIF3MQ7L2H7 374 aaKnown RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SKA3Q8IX90 412 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 FADS6Q8N9I5 356 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF565Q8N9K5 539 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 OR2V1Q8NHB1 315 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 MAGEE2Q8TD90 523 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 AP3S1Q92572 193 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 BCL2L2Q92843 193 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 CPNE4Q96A23 557 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 PDLIM5Q96HC4 596 aaKnown RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ERMAPQ96PL5 475 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 LYSTQ99698 3801 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ALKBH7Q9BT30 221 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 MS4A8Q9BY19 250 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 DNTTIP1Q9H147 329 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SLITRK2Q9H156 845 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 OR51M1Q9H341 326 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 GPR173Q9NS66 373 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 CMTM6Q9NX76 183 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 RDH8Q9NYR8 311 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 TMEM216Q9P0N5 145 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 COPZ2Q9P299 210 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ERVK-18Q9QC07 812 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 MARCOQ9UEW3 520 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ENOPH1Q9UHY7 261 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 GMPPBQ9Y5P6 360 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SLC25A15Q9Y619 301 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 A0A1W2PRV1 198 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 OR5H1A6NKK0 313 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 TEX46H3BTG2 121 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 SLC1A7O00341 560 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 PLPP1O14494 284 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF195O14628 629 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 MRASO14807 208 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 PHYHO14832 338 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 MYL12BO14950 172 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 UBDO15205 165 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 PPIHO43447 177 aaKnown RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 EFNA2O43921 213 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 TSPAN2O60636 221 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 BANF1O75531 89 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 GLCEO94923 617 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 MPZL1O95297 269 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 IFNA10P01566 189 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 IGFBP1P08833 259 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 MYL12AP19105 171 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 PCMT1P22061 227 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 IL12BP29460 328 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 INPP1P49441 399 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 EMDP50402 254 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 ERFP50548 548 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 IDH3GP51553 393 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 AKR1D1P51857 326 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 CLDN17P56750 224 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 LMO4P61968 165 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 RRAS2P62070 204 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 FGL1Q08830 312 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 CHIT1Q13231 466 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 COTL1Q14019 142 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 GANABQ14697 944 aaKnown RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 TMEM176BQ3YBM2 270 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF311Q5JNZ3 666 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 DNLZQ5SXM8 178 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 AADACL4Q5VUY2 407 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 PLBD1Q6P4A8 553 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 SLC25A47Q6Q0C1 308 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 C5orf46Q6UWT4 87 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 NPSR1Q6W5P4 371 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 FCRLAQ7L513 359 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 HSD17B13Q7Z5P4 300 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 COMTD1Q86VU5 262 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 RNF130Q86XS8 419 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF100Q8IYN0 542 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 SPAG16Q8N0X2 631 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 FAM89BQ8N5H3 189 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 WDR31Q8NA23 367 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 C19orf18Q8NEA5 215 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 DUSP18Q8NEJ0 188 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 OR4K14Q8NGD5 310 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 OR52E4Q8NGH9 312 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 OR9Q1Q8NGQ5 310 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 OR51F2Q8NH61 342 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 NANPQ8TBE9 248 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF431Q8TF32 576 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 CANT1Q8WVQ1 401 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 TMEM190Q8WZ59 177 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 Q96MT0 163 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 DGCR6LQ9BY27 220 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 SLC5A7Q9GZV3 580 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 NAA50Q9GZZ1 169 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms