RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 TRBV23-1A0A0A0MS06 115 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 LOC107986453A0A1B0GWG9 222 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 F8VVB4 439 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 F8VWA3 439 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 H3BNX3 289 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 SLC1A7O00341 560 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 ENTPD6O75354 484 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 CCL1P22362 96 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 COX7A1P24310 79 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 UBE2E1P51965 193 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
RAB40B-204ENST00000571554 NCR3LG1Q68D85 454 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 Q6ZSR3 168 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 Q6ZSV7 163 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 FAM220AQ7Z4H9 259 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 DMRTB1Q96MA1 342 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 ADI1Q9BV57 179 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 SLC7A11Q9UPY5 501 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 POLDIP2Q9Y2S7 368 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 CMYA5Q8N3K9 4069 aa11.23□□□□□ -0.61
RAB40B-204ENST00000571554 BTBD17A6NE02 478 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 WIPF1O43516 503 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 ALPLP05186 524 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 CALCBP10092 127 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 MPZP25189 248 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 BMXP51813 675 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 COL10A1Q03692 680 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 ZNF273Q14593 569 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 LY6EQ16553 131 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 TMEM200BQ69YZ2 307 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 DHRS7BQ6IAN0 325 aaPredicted RBP11.22□□□□□ -0.61
RAB40B-204ENST00000571554 ZNF782Q6ZMW2 699 aaPredicted RBP11.22□□□□□ -0.61
RAB40B-204ENST00000571554 GDPGP1Q6ZNW5 385 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 C1orf122Q6ZSJ8 110 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 ZNF561Q8N587 486 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 ASCC1Q8N9N2 400 aaKnown RBP11.22□□□□□ -0.61
RAB40B-204ENST00000571554 RFKQ969G6 155 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 ITFG2Q969R8 447 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 RNF166Q96A37 237 aaPredicted RBP11.22□□□□□ -0.61
RAB40B-204ENST00000571554 RNFT2Q96EX2 444 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 HES4Q9HCC6 221 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 IL36RNQ9UBH0 155 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 VPREB3Q9UKI3 123 aa11.22□□□□□ -0.61
RAB40B-204ENST00000571554 A0A1B0GUS0 222 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 DHRS7CA6NNS2 312 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 H3BUX3 64 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 KCNAB3O43448 404 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 NOS1APO75052 506 aaPredicted RBP11.21□□□□□ -0.61
RAB40B-204ENST00000571554 SULT1C4O75897 302 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 TK1P04183 234 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 SNU13P55769 128 aaKnown RBP11.21□□□□□ -0.61
RAB40B-204ENST00000571554 ERVK11-1P61568 191 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 IL24Q13007 206 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 SLC25A26Q70HW3 274 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 CBR4Q8N4T8 237 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 OR5D13Q8NGL4 314 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 ADAT3Q96EY9 351 aaPredicted RBP11.21□□□□□ -0.61
RAB40B-204ENST00000571554 CEP19Q96LK0 163 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 MBOAT4Q96T53 435 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 PKIBQ9C010 78 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 PPA2Q9H2U2 334 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.21□□□□□ -0.61
RAB40B-204ENST00000571554 SF3B6Q9Y3B4 125 aaKnown RBP11.21□□□□□ -0.61
RAB40B-204ENST00000571554 ORC6Q9Y5N6 252 aa11.21□□□□□ -0.61
RAB40B-204ENST00000571554 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 GATBO75879 557 aaKnown RBP11.2□□□□□ -0.62
RAB40B-204ENST00000571554 POU3F4P49335 361 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 EDDM3BP56851 147 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 OR12D2P58182 307 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 NANOS3P60323 173 aaKnown RBP11.2□□□□□ -0.62
RAB40B-204ENST00000571554 ISL1P61371 349 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 ACSM1Q08AH1 577 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 PLA1AQ53H76 456 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 CCDC121Q6ZUS5 278 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 C11orf42Q8N5U0 333 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 ZSCAN4Q8NAM6 433 aaPredicted RBP11.2□□□□□ -0.62
RAB40B-204ENST00000571554 OR2G2Q8NGZ5 317 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 OR10AC1Q8NH08 325 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 EMG1Q92979 244 aaKnown RBP11.2□□□□□ -0.62
RAB40B-204ENST00000571554 RFT1Q96AA3 541 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 BORCS8Q96FH0 119 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 AJUBAQ96IF1 538 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 HRASLS5Q96KN8 279 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 SSX3Q99909 188 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 CITED1Q99966 193 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 CHST5Q9GZS9 411 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 USE1Q9NZ43 259 aa11.2□□□□□ -0.62
RAB40B-204ENST00000571554 J3QLW9 94 aa11.19□□□□□ -0.62
RAB40B-204ENST00000571554 UBCP0CG48 685 aaKnown RBP11.19□□□□□ -0.62
RAB40B-204ENST00000571554 ZNF19P17023 458 aa11.19□□□□□ -0.62
RAB40B-204ENST00000571554 DUSP1P28562 367 aa11.19□□□□□ -0.62
RAB40B-204ENST00000571554 ALDH3A2P51648 485 aa11.19□□□□□ -0.62
RAB40B-204ENST00000571554 FUT6P51993 359 aa11.19□□□□□ -0.62
RAB40B-204ENST00000571554 PROK1P58294 105 aa11.19□□□□□ -0.62
RAB40B-204ENST00000571554 RPL15P61313 204 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms