RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 OR9Q1Q8NGQ5 310 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR6K6Q8NGW6 343 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR5K1Q8NHB7 308 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DL5BQ8NHK3 375 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 RHOXF1Q8NHV9 184 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SYNPRQ8TBG9 265 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 CYGBQ8WWM9 190 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 EDARADDQ8WWZ3 215 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 DNASE2BQ8WZ79 361 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR5P2Q8WZ92 322 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ATOH1Q92858 354 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 EXTL1Q92935 676 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SMIM19Q96E16 107 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SDSLQ96GA7 329 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ZNF486Q96H40 463 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 PYURFQ96I23 114 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 FAM46AQ96IP4 442 aaKnown RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 SLC35G5Q96KT7 338 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 KCTD7Q96MP8 289 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ZNF681Q96N22 645 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 NODALQ96S42 347 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 S1PR3Q99500 378 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 NUDT9Q9BW91 350 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CDCA4Q9BXL8 241 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ACTR3CQ9C0K3 210 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 OR51I1Q9H343 314 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 TXNIPQ9H3M7 391 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ARMC7Q9H6L4 198 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SAP30LQ9HAJ7 183 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SEBOXQ9HB31 216 aaPredicted RBP3.09□□□□□ -1.91
SMG6-208ENST00000570874 ISYNA1Q9NPH2 558 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SLC17A5Q9NRA2 495 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 GLTPQ9NZD2 209 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 FAM30AQ9NZY2 134 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 GPR160Q9UJ42 338 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 ADAM29Q9UKF5 820 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 CDC42EP3Q9UKI2 254 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 U3KQA8 63 aa3.09□□□□□ -1.91
SMG6-208ENST00000570874 SPEGQ15772 3267 aa3.09□□□□□ -1.92
SMG6-208ENST00000570874 IGHV1OR21-1A0A087WYE8 117 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 NSG1A0A0A6YYJ2 146 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 A0A0G2JMP0 313 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 A0A1B0GUS0 222 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 LOC100130705A0A1B0GUX0 176 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 LILRA5A6NI73 299 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SEC14L6B5MCN3 397 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 LMO7DNF2Z398 122 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 H0YL77 283 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TMX2-CTNND1H3BSU7 103 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 K7EN84 100 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GPR31O00270 319 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC17A3O00476 420 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GNGT2O14610 69 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 RGS5O15539 181 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CYB5BO43169 146 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CHST10O43529 356 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PDE6DO43924 150 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PRKNO60260 465 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 MPZL2O60487 215 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GALR3O60755 368 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 GGCTO75223 188 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 ENTPD6O75354 484 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PTTG1O95997 202 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 IFNA1P01562 189 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CRYAAP02489 173 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 RLN2P04090 185 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TYMSP04818 313 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 RPLP0P05388 317 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 FABP3P05413 133 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 HTR1AP08908 422 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC35G6P0C7Q6 338 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 FAM87AP0C7U9 286 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TRAPPC2P0DI81 140 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 TRAPPC2BP0DI82 140 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ACP2P11117 423 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 FOLR1P15328 257 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 ALOX5APP20292 161 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PVALBP20472 110 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 PPIBP23284 216 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 DUSP1P28562 367 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 NTSP30990 170 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CNR2P34972 360 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PIGAP37287 484 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 RPL3P39023 403 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 DCTP40126 519 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 KIR2DL3P43628 341 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 GLIPR1P48060 266 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SULT1A1P50225 295 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SULT1A2P50226 295 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 WNT4P56705 351 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 KLF3P57682 345 aaPredicted RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 CLRN1P58418 232 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 STXBP1P61764 594 aaKnown RBP3.08□□□□□ -1.92
SMG6-208ENST00000570874 SLC35B1P78383 322 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 BTG2P78543 158 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 CDK6Q00534 326 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 IFITM2Q01629 132 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 SRYQ05066 204 aa3.08□□□□□ -1.92
SMG6-208ENST00000570874 PRKCDQ05655 676 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms