RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 DPAGT1Q9H3H5 408 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 METTL8Q9H825 291 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 SLC22A13Q9Y226 551 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 V9GYS6 101 aa11.27□□□□□ -0.61
GTF3C1-211ENST00000569653 SNTNA6NMZ2 147 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 LOC110117498-PIK3R3F6TDL0 507 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 F8VVB4 439 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 F8VWA3 439 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 H3BUX3 64 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 DHRS3O75911 302 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 APOL3O95236 402 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 OR2T7P0C7T2 308 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 CCL3L1P16619 93 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 PEX2P28328 305 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF273Q14593 569 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 ZBTB37Q5TC79 503 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 MEDAGQ5VYS4 303 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 SLC35E4Q6ICL7 350 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 GDPGP1Q6ZNW5 385 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 CALHM1Q8IU99 346 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 ELMOD2Q8IZ81 293 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 FAM185AQ8N0U4 392 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 DYNAPQ8N1N2 210 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 BEND2Q8NDZ0 799 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 OR2T27Q8NH04 317 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 NRIP2Q9BQI9 281 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 HES4Q9HCC6 221 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 GMPPBQ9Y5P6 360 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 R4GMQ9 66 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
GTF3C1-211ENST00000569653 A0A1W2PQL4 384 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 H3BSH0 61 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 J3QT63 122 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 CASQ2O14958 399 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 ANGPTL7O43827 346 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 CHST1O43916 411 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 NRASP01111 189 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 KRT8P05787 483 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 ATP6V1B1P15313 513 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 EEF1B2P24534 225 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 HAAOP46952 286 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 BMXP51813 675 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 DLX6P56179 175 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 SNRPGP62308 76 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 ACSM1Q08AH1 577 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 LRRC36Q1X8D7 754 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 SLC25A30Q5SVS4 291 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 BCL2L15Q5TBC7 163 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 OR10H4Q8NGA5 316 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 OR4M1Q8NGD0 313 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 UBE2FQ969M7 185 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 HIST1H2AAQ96QV6 131 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 TBX5Q99593 518 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 PPA2Q9H2U2 334 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 MMP27Q9H306 513 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 DCLRE1BQ9H816 532 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 ENPP5Q9UJA9 477 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 OR52A1Q9UKL2 312 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 GTF2A1LQ9UNN4 478 aa11.25□□□□□ -0.61
GTF3C1-211ENST00000569653 DNAH3Q8TD57 4116 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 NOTCH3Q9UM47 2321 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 IGKV1-27A0A075B6S5 117 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 TRBV23-1A0A0A0MS06 115 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 MEX3AA1L020 520 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 M0QZ24 198 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 MPZL2O60487 215 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 NOS1APO75052 506 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 ENTPD6O75354 484 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 CCL1P22362 96 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 MPZP25189 248 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 PRDX2P32119 198 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 ERVK11-1P61568 191 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 ACTC1P68032 377 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 ACTA1P68133 377 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 LY6EQ16553 131 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 OGFRL1Q5TC84 451 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 TCF23Q7RTU1 214 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 FAM220AQ7Z4H9 259 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 ANGPTL5Q86XS5 388 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 YIPF7Q8N8F6 280 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 ZNF671Q8TAW3 534 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 NRG4Q8WWG1 115 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 RDH12Q96NR8 316 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 SSX3Q99909 188 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 TCF7L1Q9HCS4 588 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 SNX5Q9Y5X3 404 aa11.24□□□□□ -0.61
GTF3C1-211ENST00000569653 KIAA2026Q5HYC2 2103 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 H0YAE9 185 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 SULT1C4O75897 302 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 PAHP00439 452 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 TGFBR2P37173 567 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 EFNB2P52799 333 aa11.23□□□□□ -0.61
GTF3C1-211ENST00000569653 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms