RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 Q5BKY6 102 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 CNIH2Q6PI25 160 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 LRFN4Q6PJG9 635 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 MOGAT3Q86VF5 341 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 TPRA1Q86W33 373 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 C1orf87Q8N0U7 546 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 PNKDQ8N490 385 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 BEND2Q8NDZ0 799 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 LRRC20Q8TCA0 184 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 MEGF10Q96KG7 1140 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 CMTM3Q96MX0 182 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 PRR25Q96S07 402 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 ARPC5LQ9BPX5 153 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 AIFM2Q9BRQ8 373 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 LIN7BQ9HAP6 207 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 SIRT7Q9NRC8 400 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 C20orf141Q9NUB4 165 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 ZMAT5Q9UDW3 170 aaKnown RBP9.1□□□□□ -0.95
CDH3-208ENST00000569036 GLS2Q9UI32 602 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 PRELID1Q9Y255 219 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 KPTNQ9Y664 436 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 A0A087WUJ7 227 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 IGHV3-64DA0A0J9YX35 117 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 LRRC30A6NM36 301 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 H3BN98 237 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 OR2T1O43869 369 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 PRAF2O60831 178 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 PEX14O75381 377 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 SERPINI2O75830 405 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 KITLGP21583 273 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 PRKACBP22694 351 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 AQP1P29972 269 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 PMELP40967 661 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 GDI2P50395 445 aaKnown RBP9.09□□□□□ -0.95
CDH3-208ENST00000569036 BIDP55957 195 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 DLX1P56177 255 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 CDK5Q00535 292 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 GUCA2AQ02747 115 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 KLRD1Q13241 179 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 TOR2AQ5JU69 321 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 LIPKQ5VXJ0 399 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 C1orf94Q6P1W5 598 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 UNQ9370/PRO34162Q6UXP9 181 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 LRRC18Q8N456 261 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 OR10AD1Q8NGE0 317 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 OR52J3Q8NH60 311 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 BBS10Q8TAM1 723 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 GATAD1Q8WUU5 269 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 MAL2Q969L2 176 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 SLC41A3Q96GZ6 507 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 ZNF582Q96NG8 517 aaPredicted RBP9.09□□□□□ -0.95
CDH3-208ENST00000569036 ATF6BQ99941 703 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 MED28Q9H204 178 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 POFUT1Q9H488 388 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 BCL2L10Q9HD36 194 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 MCUBQ9NWR8 336 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 DNAJC27Q9NZQ0 273 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 HSPB11Q9Y547 144 aa9.09□□□□□ -0.95
CDH3-208ENST00000569036 FCN3O75636 299 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 TPPPO94811 219 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 IGHA1P01876 353 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 DBIP07108 87 aaKnown RBP9.08□□□□□ -0.96
CDH3-208ENST00000569036 CTRB1P17538 263 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 POU1F1P28069 291 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 TAS2R43P59537 309 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 RAB14P61106 215 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 PITPNAQ00169 270 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 PUDPQ08623 228 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 SYPL1Q16563 259 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 PLA1AQ53H76 456 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 CTRB2Q6GPI1 263 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 LAMTOR1Q6IAA8 161 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 C22orf42Q6IC83 251 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 PYHIN1Q6K0P9 492 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 TEX261Q6UWH6 196 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 LHFPL2Q6ZUX7 228 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 BTN2A1Q7KYR7 527 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 SBSPONQ8IVN8 264 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 TCEANCQ8N8B7 351 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 SLC37A3Q8NCC5 494 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 ZNF485Q8NCK3 441 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 AKR7LQ8NHP1 331 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 TEX47Q8TBZ9 253 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 RFT1Q96AA3 541 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 PRRC1Q96M27 445 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 FAM234AQ9H0X4 552 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 P2RX2Q9UBL9 471 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 DNAJB11Q9UBS4 358 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 KIF25Q9UIL4 384 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 EXOGQ9Y2C4 368 aaKnown RBP9.08□□□□□ -0.96
CDH3-208ENST00000569036 BOLA1Q9Y3E2 137 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 U3KQ87 197 aa9.08□□□□□ -0.96
CDH3-208ENST00000569036 IGKV1D-42A0A075B6H8 117 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 TRAV36DV7A0A075B6V5 113 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 TRBV4-1A0A0J9YWV2 114 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 CHP2O43745 196 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 RAMP3O60896 148 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 THY1P04216 161 aa9.07□□□□□ -0.96
CDH3-208ENST00000569036 ZNF32P17041 273 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms