RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 A0A1W2PR64 198 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 A0A1W2PRV1 198 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 A0A1W2PRX2 142 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 PQLC2LA1A4F0 135 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 ACOD1A6NK06 481 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 VGLL3A8MV65 326 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 ODF3BA8MYP8 253 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 M0R129 80 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 XPNPEP2O43895 674 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 DHRS3O75911 302 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 ATP6V1B1P15313 513 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 MNAT1P51948 309 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 LOXL3P58215 753 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 COL10A1Q03692 680 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 CNN3Q15417 329 aaKnown RBP12.51□□□□□ -0.41
NME3-211ENST00000568561 ZNF829Q3KNS6 432 aaPredicted RBP12.51□□□□□ -0.41
NME3-211ENST00000568561 ARSJQ5FYB0 599 aaPredicted RBP12.51□□□□□ -0.41
NME3-211ENST00000568561 ANGPTL5Q86XS5 388 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 ZNF679Q8IYX0 411 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 ARHGAP24Q8N264 748 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 Q8N2B8 174 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 TRMT10AQ8TBZ6 339 aaKnown RBP12.51□□□□□ -0.41
NME3-211ENST00000568561 WIPF2Q8TF74 440 aaPredicted RBP12.51□□□□□ -0.41
NME3-211ENST00000568561 CANT1Q8WVQ1 401 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 ZNF556Q9HAH1 456 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 TVP23BQ9NYZ1 205 aa12.51□□□□□ -0.41
NME3-211ENST00000568561 COL7A1Q02388 2944 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 H3BSH0 61 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 PEX14O75381 377 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 INMTO95050 263 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 RIDAP52758 137 aaKnown RBP12.5□□□□□ -0.41
NME3-211ENST00000568561 EDDM3BP56851 147 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 BLCAPP62952 87 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 ROM1Q03395 351 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 DYNC1I2Q13409 638 aaKnown RBP12.5□□□□□ -0.41
NME3-211ENST00000568561 GK3PQ14409 553 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 SNAPC1Q16533 368 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 CLVS2Q5SYC1 327 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 DEGS2Q6QHC5 323 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 BCDIN3DQ7Z5W3 292 aaKnown RBP12.5□□□□□ -0.41
NME3-211ENST00000568561 NDUFA11Q86Y39 141 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 ZNF573Q86YE8 665 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 RPS4Y2Q8TD47 263 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 BCAS4Q8TDM0 211 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 FOXRED1Q96CU9 486 aaPredicted RBP12.5□□□□□ -0.41
NME3-211ENST00000568561 ASB9Q96DX5 294 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 NSL1Q96IY1 281 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 APOL4Q9BPW4 351 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 SLC25A19Q9HC21 320 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 POLDIP2Q9Y2S7 368 aa12.5□□□□□ -0.41
NME3-211ENST00000568561 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 F8VVB4 439 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 F8VWA3 439 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 F2RL2O00254 374 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
NME3-211ENST00000568561 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
NME3-211ENST00000568561 EMX1Q04741 257 aaPredicted RBP12.49□□□□□ -0.41
NME3-211ENST00000568561 GABPB1Q06547 395 aaPredicted RBP12.49□□□□□ -0.41
NME3-211ENST00000568561 BCL2L15Q5TBC7 163 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 LCN1P1Q5VSP4 162 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 FOXB2Q5VYV0 432 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 ZNF626Q68DY1 528 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 TMEM42Q69YG0 159 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 TCF23Q7RTU1 214 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 OR4F17Q8NGA8 305 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 OR13D1Q8NGV5 346 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 OR4F4Q96R69 305 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 CNN2Q99439 309 aaKnown RBP12.49□□□□□ -0.41
NME3-211ENST00000568561 PRSS22Q9GZN4 317 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 SLC22A13Q9Y226 551 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
NME3-211ENST00000568561 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
NME3-211ENST00000568561 RYR3Q15413 4870 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 A0A1B0GTI1 187 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 FAM230AA0A1W2PPH8 454 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 K7N7A8 449 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 PRKYO43930 277 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 ZNF737O75373 536 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 ZNF254O75437 659 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 ZNF728P0DKX0 622 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 IGHV1-8P0DP01 117 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 IGLL1P15814 213 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 MPZP25189 248 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 VDAC2P45880 294 aaPredicted RBP12.48□□□□□ -0.41
NME3-211ENST00000568561 CXCR4P61073 352 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 EDDM3AQ14507 147 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 ODF4Q2M2E3 257 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 ZNF322Q6U7Q0 402 aaPredicted RBP12.48□□□□□ -0.41
NME3-211ENST00000568561 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 OR14K1Q8NGZ2 314 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 ASB17Q8WXJ9 295 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 CADM1Q9BY67 442 aaKnown RBP12.48□□□□□ -0.41
NME3-211ENST00000568561 OR52A1Q9UKL2 312 aa12.48□□□□□ -0.41
NME3-211ENST00000568561 V9GYS6 101 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms