RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-222	ENST00000568444	SRRM5	B3KS81	715 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	C3orf80	F5H4A9	247 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444		H3BMQ9	156 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SLC17A2	O00624	439 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SLC22A1	O15245	554 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IL1A	P01583	271 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IGKV1D-12	P01611	117 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CSTB	P04080	98 aa	Known RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CALCB	P10092	127 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SERPINA2	P20848	420 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CFHR2	P36980	270 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RPS19	P39019	145 aa	Known RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GPR6	P46095	362 aa	Predicted RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CLDN12	P56749	244 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RIN1	Q13671	783 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CLEC12B	Q2HXU8	276 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444		Q5PR19	223 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	C1orf100	Q5SVJ3	147 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	AVPI1	Q5T686	147 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SFXN4	Q6P4A7	337 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	C1QL2	Q7Z5L3	287 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NR2C2AP	Q86WQ0	139 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	LYPD6	Q86Y78	171 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444		Q8IYB0	196 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PXT1	Q8NFP0	134 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	OR10K1	Q8NGX5	313 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RAB1C	Q92928	201 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	EMG1	Q92979	244 aa	Known RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RBM38	Q9H0Z9	239 aa	Known RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RBFOX1	Q9NWB1	397 aa	Known RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NDUFA13	Q9P0J0	144 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RSL24D1	Q9UHA3	163 aa	Known RBP	12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	STEAP1	Q9UHE8	339 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	DAPK2	Q9UIK4	370 aa		12	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PPIAL4E	A0A075B759	164 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IGHV3OR15-7	A0A075B7D8	119 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444		A0A0G2JK05	382 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IFITM5	A6NNB3	132 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PPIAL4D	F5H284	164 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	AIP	O00170	330 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	KDM4B	O94953	1096 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	HTR3B	O95264	441 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	LHB	P01229	141 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PPIAL4F	P0DN26	164 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SLC2A2	P11168	524 aa	Predicted RBP	11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PRKACA	P17612	351 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RANBP1	P43487	201 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NPBWR2	P48146	333 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SNU13	P55769	128 aa	Known RBP	11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	TMEM33	P57088	247 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	DSCR9	P59020	149 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	BTG1	P62324	171 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SPCS2	Q15005	226 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SMIM21	Q3B7S5	101 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SLC22A6	Q4U2R8	563 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FIP1L1	Q6UN15	594 aa	Known RBP	11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	DEFB108B	Q8NET1	73 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	C12orf43	Q96C57	262 aa	Known RBP	11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NRIP2	Q9BQI9	281 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	WDR13	Q9H1Z4	485 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NARFL	Q9H6Q4	476 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ITGB1BP2	Q9UKP3	347 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	WIPI2	Q9Y4P8	454 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PPIAL4A	Q9Y536	164 aa		11.99	□□□□□ -0.49
KLHDC4-222	ENST00000568444	OOEP	A6NGQ2	149 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444		F8VVB4	439 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444		F8VWA3	439 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NDUFS8	O00217	210 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NOS1AP	O75052	506 aa	Predicted RBP	11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ZNF780A	O75290	641 aa	Predicted RBP	11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CRTAP	O75718	401 aa	Predicted RBP	11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SFTPB	P07988	381 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ACAA1	P09110	424 aa	Predicted RBP	11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	UBB	P0CG47	229 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ARSB	P15848	533 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ART1	P52961	327 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GPR176	Q14439	515 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	MICB	Q29980	383 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IDNK	Q5T6J7	187 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	ACP7	Q6ZNF0	438 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	FAM58A	Q8N1B3	248 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	TBC1D15	Q8TC07	691 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	C10orf105	Q8TEF2	133 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	SEH1L	Q96EE3	360 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	BPESC1	Q9GZL8	116 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	KCNK15	Q9H427	330 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	LIN7B	Q9HAP6	207 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	PCDHB16	Q9NRJ7	776 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	RASL12	Q9NYN1	266 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	NLK	Q9UBE8	527 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444	GHRL	Q9UBU3	117 aa		11.98	□□□□□ -0.49
KLHDC4-222	ENST00000568444		A0A0B4J203	849 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	TRAV38-1	A0A0B4J264	116 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444		A0A1W2PP11	408 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	LGALS8	O00214	317 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	BPNT1	O95861	308 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	IGHV2-70	P01814	119 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	CD37	P11049	281 aa		11.97	□□□□□ -0.49
KLHDC4-222	ENST00000568444	BMX	P51813	675 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms