RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SUCNR1Q9BXA5 334 aa13.71□□□□□ -0.21
COMMD4-215ENST00000566843 UNKLQ9H9P5 680 aaKnown RBP13.71□□□□□ -0.21
COMMD4-215ENST00000566843 NSG1A0A0A6YYJ2 146 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 E9PLN8 166 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 XRCC2O43543 280 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 RAMP1O60894 148 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 IGHG1P01857 330 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 KLK3P07288 261 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 OR5H8P0DN80 308 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 BLKP51451 505 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 CCR5P51681 352 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 AFF3P51826 1226 aaKnown RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF133P52736 654 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 NDUFA6P56556 154 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 MRPS21P82921 87 aaKnown RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 DEFA6Q01524 100 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 FOXF1Q12946 379 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 SP5Q6BEB4 398 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 LIAT1Q6ZQX7 453 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 Q6ZSR3 168 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 C6orf201Q7Z4U5 140 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF610Q8N9Z0 462 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 HSD17B11Q8NBQ5 300 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 FAM213BQ8TBF2 198 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 DUSP15Q9H1R2 295 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 V9GYS6 101 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 RP1P56715 2156 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 RBFOX3A6NFN3 312 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 SEC14L6B5MCN3 397 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 EFNA2O43921 213 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 DIRAS3O95661 229 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 OR5AC1P0C628 307 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 GABRG2P18507 467 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 DUSP1P28562 367 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 NHLH2Q02577 135 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 SPSB3Q6PJ21 355 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 TMEM182Q6ZP80 229 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 LYZL2Q7Z4W2 148 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 UEVLDQ8IX04 471 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 DEFB123Q8N688 67 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 HLA-CQ95604 372 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 LIN37Q96GY3 246 aaPredicted RBP13.7□□□□□ -0.22
COMMD4-215ENST00000566843 PRDM13Q9H4Q3 707 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 HSF4Q9ULV5 492 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 F5P12259 2224 aa13.7□□□□□ -0.22
COMMD4-215ENST00000566843 C5orf63A6NC05 138 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 BTBD17A6NE02 478 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 VSTM2BA6NLU5 285 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 H3BQ15 152 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 HSD17B6O14756 317 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 RD3LP0DJH9 198 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 ZNF728P0DKX0 622 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 ELOBQ15370 118 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 UBE2V2Q15819 145 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 SP6Q3SY56 376 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 C14orf28Q4W4Y0 310 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 KIAA0895LQ68EN5 471 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 CDPF1Q6NVV7 123 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 HAS2Q92819 552 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 SLAMF9Q96A28 289 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 RAB39BQ96DA2 213 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 Q96M66 194 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 HDHD3Q9BSH5 251 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 PHF7Q9BWX1 381 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 C11orf1Q9H5F2 150 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 COL6A3P12111 3177 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 ST8SIA3O43173 380 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 TRAF3IP2O43734 574 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 SRP19P09132 144 aaKnown RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 SLC25A53Q5H9E4 307 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 RTN4IP1Q8WWV3 396 aaPredicted RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 MSI2Q96DH6 328 aaKnown RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 MARS2Q96GW9 593 aaKnown RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 PLEKHJ1Q9NW61 149 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 VDAC3Q9Y277 283 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 RCL1Q9Y2P8 373 aaKnown RBP13.69□□□□□ -0.22
COMMD4-215ENST00000566843 PIAS3Q9Y6X2 628 aa13.69□□□□□ -0.22
COMMD4-215ENST00000566843 EXPH5Q8NEV8 1989 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 TCRBV21S2A2A0A5A6 115 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 CXorf65A6NEN9 183 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 METTL12A8MUP2 240 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 TMEM225BP0DP42 221 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 FCGR2AP12318 317 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 CSNK1A1P48729 337 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 CCL20P78556 96 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 HIST3H3Q16695 136 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 FBXW12Q6X9E4 464 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 OR52M1Q8NGK5 317 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 OR4D5Q8NGN0 318 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 OR6X1Q8NH79 312 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 NPRL2Q8WTW4 380 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 Q8WTZ3 238 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 PP6455Q8WZ26 134 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 PGAM5Q96HS1 289 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 SIRT7Q9NRC8 400 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 NECAP2Q9NVZ3 263 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 MMP24Q9Y5R2 645 aa13.68□□□□□ -0.22
COMMD4-215ENST00000566843 A0A0U1RQV5 110 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms