RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 FCN3O75636 299 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 MT-ND2P03891 347 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 AMY2BP19961 511 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 SOX2P48431 317 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 ATP1B3P54709 279 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 BDH1Q02338 343 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 IL24Q13007 206 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 ATPAF1Q5TC12 328 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 SERPINA12Q8IW75 414 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 OR5T2Q8NGG2 359 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 OR5D14Q8NGL3 314 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 OR13C5Q8NGS8 318 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 SPSB1Q96BD6 273 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 TMIGD2Q96BF3 282 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 OR5M11Q96RB7 305 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 CCL13Q99616 98 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 MDFIQ99750 246 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 DNTTIP1Q9H147 329 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 Q9H521 79 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 OCEL1Q9H607 264 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 RASL12Q9NYN1 266 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 NLKQ9UBE8 527 aa11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-210ENST00000565966 TRBV5-5A0A0J9YX44 114 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 A0A1B0GW55 424 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 C22orf46C9J442 243 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 TCF21O43680 179 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ALX3O95076 343 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ECDO95905 644 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 FSHBP01225 129 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 TFF1P04155 84 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 CD1AP06126 327 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 LIPFP07098 398 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ACAA1P09110 424 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 EPHA1P21709 976 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 RBP2P50120 134 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 MTCP1P56278 107 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ACSM1Q08AH1 577 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 SPHARQ15513 63 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ARMCX4Q5H9R4 360 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ASPHD2Q6ICH7 369 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4L9Q6RFH8 374 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ACP7Q6ZNF0 438 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 LHFPL2Q6ZUX7 228 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 BATF2Q8N1L9 274 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 ANGPTL6Q8NI99 470 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 OPALINQ96PE5 141 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 NRIP2Q9BQI9 281 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 SMURF1Q9HCE7 757 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
HERPUD1-210ENST00000565966 IGKV1D-17A0A075B6S4 117 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 A0A0A6YYJ9 748 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 OR2AT4A6NND4 320 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 GPR37O15354 613 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 NDUFB3O43676 98 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 SULT1B1O43704 296 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 PLATP00750 562 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 CD2P06729 351 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 OCM2P0CE71 109 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 PSG2P11465 335 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 CELP19835 753 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 FPR2P25090 351 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 ERVK11-1P61568 191 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 YIF1BQ5BJH7 314 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF529Q6P280 563 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 CRIP3Q6Q6R5 217 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF788Q6ZQV5 615 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 SLC25A26Q70HW3 274 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 BTN2A1Q7KYR7 527 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 PRSS48Q7RTY5 328 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 FAM216BQ8N7L0 139 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 PNLDC1Q8NA58 520 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 ST8SIA4Q92187 359 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 TMEM106AQ96A25 262 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 SLAMF9Q96A28 289 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 MED30Q96HR3 178 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 GAFA1Q96PS6 74 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 SPACA5Q96QH8 159 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 CCDC90BQ9GZT6 254 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 HES4Q9HCC6 221 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 TAS2R4Q9NYW5 299 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 MTCH1Q9NZJ7 389 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 ZNF222Q9UK12 451 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 NUP50Q9UKX7 468 aa11.46□□□□□ -0.57
HERPUD1-210ENST00000565966 BLOC1S6Q9UL45 172 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms