RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 C17orf100A8MU93 164 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 FAM25AB3EWG3 89 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 FAM25CB3EWG5 89 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 FAM25GB3EWG6 89 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 LDLRAD4O15165 306 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 SYNGR1O43759 233 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 APOA1P02647 267 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 EIF4EP06730 217 aaKnown RBP9.39□□□□□ -0.91
SF3B3-205ENST00000564899 ELK1P19419 428 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 TNFSF8P32971 234 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 SRP9P49458 86 aaKnown RBP9.39□□□□□ -0.91
SF3B3-205ENST00000564899 TNFAIP6P98066 277 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-205ENST00000564899 PLA2G7Q13093 441 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 ZNF154Q13106 437 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 MAB21L1Q13394 359 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 RSU1Q15404 277 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 FAM76BQ5HYJ3 339 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 PRAMEF6Q5VXH4 476 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 OR10K2Q6IF99 312 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 ASCL4Q6XD76 172 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 OR2W3Q7Z3T1 314 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 LRRC28Q86X40 367 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-205ENST00000564899 MKXQ8IYA7 352 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 SCCPDHQ8NBX0 429 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 OR10K1Q8NGX5 313 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 AQP3Q92482 292 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 FAM46BQ96A09 425 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 SLAMF9Q96A28 289 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 SLC25A38Q96DW6 304 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 MEGF10Q96KG7 1140 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 C1orf147Q96MC9 270 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-205ENST00000564899 CMTM3Q96MX0 182 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 OR2V2Q96R30 315 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 CST11Q9H112 138 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-205ENST00000564899 FAIMQ9NVQ4 179 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 RHBDL2Q9NX52 303 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 POLDIP2Q9Y2S7 368 aa9.39□□□□□ -0.91
SF3B3-205ENST00000564899 SONP18583 2426 aaKnown RBP9.39□□□□□ -0.91
SF3B3-205ENST00000564899 ROS1P08922 2347 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 A0A1W2PPR1 153 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 TMEM14DPA8MWL7 114 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 TRAPPC2LH3BP13 241 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 CDIPTO14735 213 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 CDC14BO60729 498 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 ZNF780AO75290 641 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-205ENST00000564899 CRTAPO75718 401 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-205ENST00000564899 KDM4BO94953 1096 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 MPIG6BO95866 241 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 ADH4P08319 380 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 BMP4P12644 408 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 FOSL1P15407 271 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 RAB6AP20340 208 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 SERPINA2P20848 420 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 MPZP25189 248 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 TALDO1P37837 337 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 EFNB2P52799 333 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 QRFPP83859 136 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 IL24Q13007 206 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 UNC119Q13432 240 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 GPR176Q14439 515 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 SWI5Q1ZZU3 235 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 MST1LQ2TV78 715 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 AGAP6Q5VW22 663 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 CNIH2Q6PI25 160 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 BIVMQ86UB2 503 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 CCDC190Q86UF4 302 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 CIARTQ8N365 385 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-205ENST00000564899 CELF2-AS1Q8N7Q2 184 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 TMEM104Q8NE00 496 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 KCNG3Q8TAE7 436 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 ITLN1Q8WWA0 313 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 RAB40AQ8WXH6 277 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 PTX4Q96A99 478 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 DIRAS2Q96HU8 199 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 TMEM59Q9BXS4 323 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 TLNRD1Q9H1K6 362 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 MS4A5Q9H3V2 200 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 UBTD1Q9HAC8 227 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 UFSP2Q9NUQ7 469 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 IL36GQ9NZH8 169 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 FBLN5Q9UBX5 448 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 IL19Q9UHD0 177 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 RAB22AQ9UL26 194 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 ANK2Q01484 3957 aa9.38□□□□□ -0.91
SF3B3-205ENST00000564899 A0A1W2PP11 408 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 hCG_1807616A0A1W2PRN6 198 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 TPD52L2O43399 206 aaKnown RBP9.37□□□□□ -0.91
SF3B3-205ENST00000564899 RHBDL1O75783 438 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 HTR3BO95264 441 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 PTBP3O95758 552 aaKnown RBP9.37□□□□□ -0.91
SF3B3-205ENST00000564899 CSTBP04080 98 aaKnown RBP9.37□□□□□ -0.91
SF3B3-205ENST00000564899 CD55P08174 381 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 MGMTP16455 207 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 BCL3P20749 454 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 MPPED2Q15777 294 aa9.37□□□□□ -0.91
SF3B3-205ENST00000564899 PCGF3Q3KNV8 242 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms