RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 OR4S1Q8NGB4 309 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 NUDCD2Q8WVJ2 157 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF775Q96BV0 537 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 CMBLQ96DG6 245 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SCGB3A2Q96PL1 93 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SIGLEC12Q96PQ1 595 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 SRSF8Q9BRL6 282 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 NICN1Q9BSH3 213 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM165Q9HC07 324 aa6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 KLF13Q9Y2Y9 288 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 NOSIPQ9Y314 301 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-209ENST00000564678 MYO7BQ6PIF6 2116 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 C5orf63A6NC05 138 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TUBAL3A6NHL2 446 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 FOXI3A8MTJ6 420 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF724A8MTY0 619 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 KLRC4-KLRK1H3BQV0 150 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 L7N2F9 121 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 M0R233 179 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 SSX5O60225 188 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TNFSF15O95150 251 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 FCGR2AP12318 317 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 FAHP16930 419 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF708P17019 499 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 MC5RP33032 325 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 HRH1P35367 487 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 CLDN18P56856 261 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TAS2R31P59538 309 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 SEC61A1P61619 476 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 PSG4Q00888 419 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 DHRS2Q13268 280 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 OPCMLQ14982 345 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 GRK1Q15835 563 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 SNAI3Q3KNW1 292 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC22A6Q4U2R8 563 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 HES3Q5TGS1 186 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM42Q69YG0 159 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 DHRS13Q6UX07 377 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 RNF144BQ7Z419 303 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 OR51T1Q8NGJ9 327 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 OR4K15Q8NH41 348 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TERB2Q8NHR7 220 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 REEP6Q96HR9 211 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TECTBQ96PL2 329 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 OR2H1Q9GZK4 316 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 BANF2Q9H503 90 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 DKK4Q9UBT3 224 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 MCTS1Q9ULC4 181 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC45A2Q9UMX9 530 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 MAB21L2Q9Y586 359 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 R4GN57 208 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 LINC00862A6NCI5 91 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM90A7PA6NKC0 464 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM90A22PA8MWA6 464 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM90A12PA8MX19 464 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM90A23PA8MXZ1 464 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 IFNL4K9M1U5 179 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 GOSR2O14653 212 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 XRCC2O43543 280 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 NOS1APO75052 506 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 SYNGR4O95473 234 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 CD8AP01732 235 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 LCATP04180 440 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 COX5BP10606 129 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 MGMTP16455 207 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ZBTB25P24278 435 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 AGTR1P30556 359 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 HTR5AP47898 357 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 NSUN5P2Q63ZY6 315 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ZNF774Q6NX45 483 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ASCL4Q6XD76 172 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TMED4Q7Z7H5 227 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 LYG2Q86SG7 212 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM17Q86X19 198 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 HOGA1Q86XE5 327 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ABHD3Q8WU67 409 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 MITD1Q8WV92 249 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 MRPS24Q96EL2 167 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ARHGAP5-AS1Q96IT6 56 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ALKBH3Q96Q83 286 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 DPCDQ9BVM2 203 aaPredicted RBP6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 TTTY12Q9BZ98 90 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 METTL9Q9H1A3 318 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 WNT5BQ9H1J7 359 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 SLC25A32Q9H2D1 315 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 BCO1Q9HAY6 547 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 ACKR4Q9NPB9 350 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 UBQLN2Q9UHD9 624 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 VSIG4Q9Y279 399 aa6.3□□□□□ -1.4
HERPUD1-209ENST00000564678 RFPL4AA6NLU0 287 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 RFPL4AL1F8VTS6 287 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 SPRY1O43609 319 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 MPC2O95563 127 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 LY86O95711 162 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 ACTL6AO96019 429 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 HLA-AP01891 365 aaKnown RBP6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 SP1P08047 785 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 MMP7P09237 267 aaPredicted RBP6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 B4GALT1P15291 398 aa6.29□□□□□ -1.4
HERPUD1-209ENST00000564678 CD34P28906 385 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms