RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 WDR86Q86TI4 376 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 CALHM1Q8IU99 346 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 PXT1Q8NFP0 134 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 OR11L1Q8NGX0 322 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 MCFD2Q8NI22 146 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 NEU4Q8WWR8 484 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-208ENST00000564247 AQP3Q92482 292 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 SLC25A28Q96A46 364 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 FAM3DQ96BQ1 224 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 NKX3-1Q99801 234 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-208ENST00000564247 SAP30LQ9HAJ7 183 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 LIN7BQ9HAP6 207 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 UFSP2Q9NUQ7 469 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 C1orf123Q9NWV4 160 aa14.33□□□□□ -0.12
CMTM3-208ENST00000564247 BPNT1O95861 308 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 CSTBP04080 98 aaKnown RBP14.32□□□□□ -0.12
CMTM3-208ENST00000564247 IRF2P14316 349 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 CLDN12P56749 244 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 C2orf76Q3KRA6 126 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 ZNF404Q494X3 552 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 ASCL4Q6XD76 172 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 MOGAT3Q86VF5 341 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 OR51D1Q8NGF3 324 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 TBC1D15Q8TC07 691 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 TLNRD1Q9H1K6 362 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 MMP27Q9H306 513 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 SMURF1Q9HCE7 757 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 PPP1R3CQ9UQK1 317 aa14.32□□□□□ -0.12
CMTM3-208ENST00000564247 C2CD3Q4AC94 2353 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 NF1P21359 2839 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 NIPBLQ6KC79 2804 aaeCLIP14.31□□□□□ -0.12
CMTM3-208ENST00000564247 CHD3Q12873 2000 aaKnown RBP14.31□□□□□ -0.12
CMTM3-208ENST00000564247 A0A075B6Q4 140 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 hCG_1807616A0A1W2PRN6 198 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 LRRC30A6NM36 301 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 H7C417 338 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 IFNL4K9M1U5 179 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 ANGPTL7O43827 346 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 KDM4BO94953 1096 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 ACAA1P09110 424 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-208ENST00000564247 INHBBP09529 407 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 MPZP25189 248 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 CDKN1AP38936 164 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 SCAND1P57086 179 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 MPPED2Q15777 294 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 CRIP3Q6Q6R5 217 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 C1QL2Q7Z5L3 287 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 BIVMQ86UB2 503 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 C11orf53Q8IXP5 236 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 OR10Z1Q8NGY1 313 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 KCNG3Q8TAE7 436 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 HPS1Q92902 700 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 SLAMF9Q96A28 289 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 SLIRPQ9GZT3 109 aaKnown RBP14.31□□□□□ -0.12
CMTM3-208ENST00000564247 CST11Q9H112 138 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 RHOFQ9HBH0 211 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 PTTG2Q9NZH5 202 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 COMMD3Q9UBI1 195 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 ETV7Q9Y603 341 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 A3GALT2U3KPV4 340 aa14.31□□□□□ -0.12
CMTM3-208ENST00000564247 SYNGR1O43759 233 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 HTR3BO95264 441 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 SNRPBP14678 240 aaKnown RBP14.3□□□□□ -0.12
CMTM3-208ENST00000564247 BMXP51813 675 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 RIPPLY3P57055 190 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 FAM189A2Q15884 450 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 SLC22A6Q4U2R8 563 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 ZNF826PQ6ZT77 177 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 OR2W3Q7Z3T1 314 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 Q8IYB0 196 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 COX4I2Q96KJ9 171 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 CEP19Q96LK0 163 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 C6orf62Q9GZU0 229 aaPredicted RBP14.3□□□□□ -0.12
CMTM3-208ENST00000564247 GCM1Q9NP62 436 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 IL36GQ9NZH8 169 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 RNF7Q9UBF6 113 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 SPATA2Q9UM82 520 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 ZANQ9Y493 2812 aa14.3□□□□□ -0.12
CMTM3-208ENST00000564247 DYSFO75923 2080 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 A0A0B4J203 849 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 RGS5O15539 181 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 CRTAPO75718 401 aaPredicted RBP14.29□□□□□ -0.12
CMTM3-208ENST00000564247 PAHP00439 452 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 S100A5P33763 92 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 CFHR2P36980 270 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 SPRNQ5BIV9 151 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 WDR82Q6UXN9 313 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 C1orf87Q8N0U7 546 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 Q8TCH9 128 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 LRRC29Q8WV35 223 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 NXF2Q9GZY0 626 aaKnown RBP14.29□□□□□ -0.12
CMTM3-208ENST00000564247 GSX1Q9H4S2 264 aaPredicted RBP14.29□□□□□ -0.12
CMTM3-208ENST00000564247 MTCH1Q9NZJ7 389 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 OR5V1Q9UGF6 321 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 RAB22AQ9UL26 194 aa14.29□□□□□ -0.12
CMTM3-208ENST00000564247 IGKV1-12A0A0C4DH73 117 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 IGHV1-69-2A0A0G2JMI3 117 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 H7C1Q1 480 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 CDC14BO60729 498 aa14.28□□□□□ -0.12
CMTM3-208ENST00000564247 NOS1APO75052 506 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms