RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 NUFIP1Q9UHK0 495 aaKnown RBP16.89■□□□□ 0.29
HERC2-204ENST00000563945 MRPL3P09001 348 aaKnown RBP16.88■□□□□ 0.29
HERC2-204ENST00000563945 CD33P20138 364 aa16.88■□□□□ 0.29
HERC2-204ENST00000563945 CDK5Q00535 292 aa16.88■□□□□ 0.29
HERC2-204ENST00000563945 MS4A2Q01362 244 aa16.88■□□□□ 0.29
HERC2-204ENST00000563945 SNAPC1Q16533 368 aa16.88■□□□□ 0.29
HERC2-204ENST00000563945 GDPD3Q7L5L3 318 aa16.88■□□□□ 0.29
HERC2-204ENST00000563945 Q8N2B8 174 aa16.88■□□□□ 0.29
HERC2-204ENST00000563945 NSL1Q96IY1 281 aa16.88■□□□□ 0.29
HERC2-204ENST00000563945 A6NDX4 124 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 C17orf98A8MV24 154 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 F2RL2O00254 374 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 DLGAP1O14490 977 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 ANXA8P13928 327 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 EDDM3BP56851 147 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 BATF2Q8N1L9 274 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 PHF21AQ96BD5 680 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 OR8B4Q96RC9 309 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 NRIP2Q9BQI9 281 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 AURKAIP1Q9NWT8 199 aaPredicted RBP16.87■□□□□ 0.29
HERC2-204ENST00000563945 TVP23BQ9NYZ1 205 aa16.87■□□□□ 0.29
HERC2-204ENST00000563945 MEGF11A6BM72 1044 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 LOC110117498-PIK3R3F6TDL0 507 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 CHRM2P08172 466 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 ZNF728P0DKX0 622 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 VDAC2P45880 294 aaPredicted RBP16.86■□□□□ 0.29
HERC2-204ENST00000563945 ROM1Q03395 351 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 BCL2L15Q5TBC7 163 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 CCBE1Q6UXH8 406 aaPredicted RBP16.86■□□□□ 0.29
HERC2-204ENST00000563945 PIGWQ7Z7B1 504 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 DYNAPQ8N1N2 210 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 TTTY10Q9BZA0 68 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 SLC7A11Q9UPY5 501 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 SLC22A13Q9Y226 551 aa16.86■□□□□ 0.29
HERC2-204ENST00000563945 PQLC2LA1A4F0 135 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 K7N7A8 449 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 RBP4P02753 201 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 SLC2A5P22732 501 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 GNGT1P63211 74 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 COL10A1Q03692 680 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 SLC34A1Q06495 639 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 TMEM236Q5W0B7 351 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 TMEM179BQ7Z7N9 219 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 NDNFQ8TB73 568 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 CAPSLQ8WWF8 208 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 CCDC124Q96CT7 223 aaKnown RBP16.85■□□□□ 0.29
HERC2-204ENST00000563945 ASB9Q96DX5 294 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 MOB1AQ9H8S9 216 aa16.85■□□□□ 0.29
HERC2-204ENST00000563945 H2AFY2Q9P0M6 372 aaPredicted RBP16.85■□□□□ 0.29
HERC2-204ENST00000563945 A0A1W2PRX2 142 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 IGLV3-1P01715 115 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 TTRP02766 147 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 PF4V1P10720 104 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 HOXB6P17509 224 aaKnown RBP16.84■□□□□ 0.29
HERC2-204ENST00000563945 ZNF626Q68DY1 528 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 ANGPTL5Q86XS5 388 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 OR11H6Q8NGC7 330 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 ZNF714Q96N38 554 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 CNN2Q99439 309 aaKnown RBP16.84■□□□□ 0.29
HERC2-204ENST00000563945 SLC25A19Q9HC21 320 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 HILPDAQ9Y5L2 63 aa16.84■□□□□ 0.29
HERC2-204ENST00000563945 FAM230AA0A1W2PPH8 454 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 MEX3AA1L020 520 aaKnown RBP16.83■□□□□ 0.28
HERC2-204ENST00000563945 ODF3BA8MYP8 253 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 IGHV1-8P0DP01 117 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 PRKACGP22612 351 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 DLX6P56179 175 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 MEF2CQ06413 473 aaPredicted RBP16.83■□□□□ 0.28
HERC2-204ENST00000563945 MFGE8Q08431 387 aaPredicted RBP16.83■□□□□ 0.28
HERC2-204ENST00000563945 MINOS1Q5TGZ0 78 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 FOXB2Q5VYV0 432 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 ZNF322Q6U7Q0 402 aaPredicted RBP16.83■□□□□ 0.28
HERC2-204ENST00000563945 ADGRG5Q8IZF4 528 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 OR5AU1Q8NGC0 362 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 PRRG3Q9BZD7 231 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 PKIBQ9C010 78 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 WNT10AQ9GZT5 417 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 HES4Q9HCC6 221 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.83■□□□□ 0.28
HERC2-204ENST00000563945 OR52A1Q9UKL2 312 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 COPS3Q9UNS2 423 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 MINOS1-NBL1R4GNA1 71 aa16.83■□□□□ 0.28
HERC2-204ENST00000563945 hADV38S2A0JD32 116 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 A6NIN4 97 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 ZNF670-ZNF695F2Z2N8 137 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 ATP8B1O43520 1251 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 DNAJC8O75937 253 aaPredicted RBP16.82■□□□□ 0.28
HERC2-204ENST00000563945 MPIG6BO95866 241 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 IGLL1P15814 213 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 MPZP25189 248 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 DYNLT3P51808 116 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 ACTA2P62736 377 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 BLCAPP62952 87 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 ACTG2P63267 376 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 ACTC1P68032 377 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 ACTA1P68133 377 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 IL24Q13007 206 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 TMEM42Q69YG0 159 aa16.82■□□□□ 0.28
HERC2-204ENST00000563945 CENPVQ7Z7K6 275 aaPredicted RBP16.82■□□□□ 0.28
HERC2-204ENST00000563945 ELMOD2Q8IZ81 293 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms