RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CLEC1BQ9P126 229 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 ZP4Q12836 540 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 LYPD6Q86Y78 171 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 ZNF561Q8N587 486 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 SLC38A9Q8NBW4 561 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 MVB12AQ96EY5 273 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 MOB1AQ9H8S9 216 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 OSGIN2Q9Y236 505 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 RCL1Q9Y2P8 373 aaKnown RBP10.38□□□□□ -0.75
ABCA3-203ENST00000563623 MMP24Q9Y5R2 645 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 ZNF814B7Z6K7 855 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 TNFSF12O43508 249 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 EFNA2O43921 213 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 OR5AC1P0C628 307 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 ZNF529Q6P280 563 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 P4HA3Q7Z4N8 544 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 C15orf54Q8N8G6 183 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 DEFB126Q9BYW3 111 aa10.38□□□□□ -0.75
ABCA3-203ENST00000563623 MCTS1Q9ULC4 181 aaKnown RBP10.38□□□□□ -0.75
ABCA3-203ENST00000563623 NCOA6Q14686 2063 aaPredicted RBP10.37□□□□□ -0.75
ABCA3-203ENST00000563623 IGHV2-70P01814 119 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SPCS3P61009 180 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 DCDP81605 110 aaKnown RBP10.37□□□□□ -0.75
ABCA3-203ENST00000563623 PDZD11Q5EBL8 140 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 KDF1Q8NAX2 398 aaPredicted RBP10.37□□□□□ -0.75
ABCA3-203ENST00000563623 RTN4IP1Q8WWV3 396 aaPredicted RBP10.37□□□□□ -0.75
ABCA3-203ENST00000563623 WBP1LQ9NX94 342 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SPEGQ15772 3267 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SHANK1Q9Y566 2161 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 IGHV1OR21-1A0A087WYE8 117 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 NPIPA2E9PIF3 369 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 NPIPA3F8WFD2 350 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 PHF1O43189 567 aaPredicted RBP10.37□□□□□ -0.75
ABCA3-203ENST00000563623 MT-ND4LP03901 98 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 PNLIPP16233 465 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 EIF2S3P41091 472 aaKnown RBP10.37□□□□□ -0.75
ABCA3-203ENST00000563623 GNG10P50151 68 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 HERV-K104P61576 105 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 ECH1Q13011 328 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 PPA1Q15181 289 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 RAET1LQ5VY80 246 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 BTNL8Q6UX41 500 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SUMF2Q8NBJ7 301 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SH3BGRL3Q9H299 93 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 PARP11Q9NR21 331 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 H7C1Q1 480 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SOX15O60248 233 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 LCATP04180 440 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 TAS2R60P59551 318 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 NHLH2Q02577 135 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SOHLH1Q5JUK2 328 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 TCEAL6Q6IPX3 200 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 SLC25A24Q6NUK1 477 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 TOLLIPQ9H0E2 274 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 C19orf12Q9NSK7 152 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 B3GAT1Q9P2W7 334 aa10.37□□□□□ -0.75
ABCA3-203ENST00000563623 A0A087X0M5 115 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 A0A1B0GX30 115 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 TSTD3H0UI37 97 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 FCGR3AP08637 254 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 JMJD7P0C870 316 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 PGA4P0DJD7 388 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 PGA3P0DJD8 388 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 GNMTQ14749 295 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 UBE2V2Q15819 145 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 NEK7Q8TDX7 302 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 C1orf147Q96MC9 270 aaPredicted RBP10.36□□□□□ -0.75
ABCA3-203ENST00000563623 PBDC1Q9BVG4 233 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 MAGT1Q9H0U3 335 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 LMAN1LQ9HAT1 526 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 PISDQ9UG56 409 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 CACFD1Q9UGQ2 172 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 SERPINE3A8MV23 424 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 E9PLN8 166 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 LMO7DNF2Z398 122 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 GRB2P62993 217 aaKnown RBP10.36□□□□□ -0.75
ABCA3-203ENST00000563623 HAGHQ16775 308 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 NKAIN1Q4KMZ8 207 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 SLC22A25Q6T423 547 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 ATG101Q9BSB4 218 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 ZNF442Q9H7R0 627 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 PARPBPQ9NWS1 579 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 CA14Q9ULX7 337 aa10.36□□□□□ -0.75
ABCA3-203ENST00000563623 E5RGE8 158 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
ABCA3-203ENST00000563623 RAB5AP20339 215 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 NDUFA6P56556 154 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 C10orf91Q5T1B1 145 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.35□□□□□ -0.75
ABCA3-203ENST00000563623 TIPARPQ7Z3E1 657 aaKnown RBP10.35□□□□□ -0.75
ABCA3-203ENST00000563623 TMEM217Q8N7C4 229 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 ZFP62Q8NB50 900 aaPredicted RBP10.35□□□□□ -0.75
ABCA3-203ENST00000563623 OR14K1Q8NGZ2 314 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 NSG2Q9Y328 171 aa10.35□□□□□ -0.75
ABCA3-203ENST00000563623 TRIOO75962 3097 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms