RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 V9GY05 133 aa2.66□□□□□ -1.98
HERC1-215ENST00000561436 NYNRINQ9P2P1 1898 aaKnown RBP2.66□□□□□ -1.98
HERC1-215ENST00000561436 NBASA2RRP1 2371 aa2.66□□□□□ -1.98
HERC1-215ENST00000561436 ATRQ13535 2644 aa2.66□□□□□ -1.98
HERC1-215ENST00000561436 MED13Q9UHV7 2174 aa2.66□□□□□ -1.98
HERC1-215ENST00000561436 AGRNO00468 2067 aa2.65□□□□□ -1.98
HERC1-215ENST00000561436 NOTCH1P46531 2555 aa2.65□□□□□ -1.98
HERC1-215ENST00000561436 JMJD1CQ15652 2540 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 IGHV3OR16-13A0A075B7E8 117 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 CTAGE15A4D2H0 777 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 H3BQF6 201 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 PLPP1O14494 284 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 CLOCKO15516 846 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 FADS1O60427 444 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 UGT2B11O75310 529 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 GCM2O75603 506 aaPredicted RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 REM1O75628 298 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 OXSR1O95747 527 aaPredicted RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 IGHV3-48P01763 117 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 FGGP02679 453 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 TACSTD2P09758 323 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 RBMY1CP0DJD4 496 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ME2P23368 584 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 IL12BP29460 328 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 EVI2BP34910 448 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 MPIP34949 423 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ANP32AP39687 249 aaKnown RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 GPM6AP51674 278 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 BIDP55957 195 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 CARD18P57730 90 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 TAS2R39P59534 338 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 EGFEM1PQ0D2K5 195 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 DDX39BQ13838 428 aaKnown RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 TSNQ15631 228 aaKnown RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 ZNHIT3Q15649 155 aaPredicted RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 TSC22D1Q15714 1073 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 VPS26BQ4G0F5 336 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 DMRTC1Q5HYR2 192 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 PDZK1Q5T2W1 519 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 RAET1LQ5VY80 246 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 Q6ZN92 141 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 PGAP1Q75T13 922 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ZNF550Q7Z398 422 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 NANOGNBQ7Z5D8 188 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 MTERF4Q7Z6M4 381 aaKnown RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 CTAGE6Q86UF2 777 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 OR2L13Q8N349 312 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 MUC15Q8N387 334 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 C3orf56Q8N813 242 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 SNX31Q8N9S9 440 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 OR2M3Q8NG83 312 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 OR51S1Q8NGJ8 323 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 OR52I1Q8NGK6 324 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 OR2V1Q8NHB1 315 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 FNDC9Q8TBE3 224 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 FAM110BQ8TC76 370 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ACTRT1Q8TDG2 376 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ZNF418Q8TF45 676 aaPredicted RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 CDKL2Q92772 493 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 STMN2Q93045 179 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 MAGOHBQ96A72 148 aaKnown RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 S100PBPQ96BU1 408 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 C10orf35Q96D05 121 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ZNF681Q96N22 645 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 HBEGFQ99075 208 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 RNF2Q99496 336 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 RNF126Q9BV68 326 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ZNF717Q9BY31 904 aaPredicted RBP2.65□□□□□ -1.99
HERC1-215ENST00000561436 PKIBQ9C010 78 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 YY1AP1Q9H869 796 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 SLC25A22Q9H936 323 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 GIN1Q9NXP7 522 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 TAS2R7Q9NYW3 318 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 MAT2BQ9NZL9 334 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 CES1P1Q9UKY3 287 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 ZNF337Q9Y3M9 751 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 UGT2A1Q9Y4X1 527 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 NPTNQ9Y639 398 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 UNC13CQ8NB66 2214 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 MTORP42345 2549 aa2.65□□□□□ -1.99
HERC1-215ENST00000561436 NBEAL2Q6ZNJ1 2754 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 DOCK4Q8N1I0 1966 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 A0A0G2JN53 185 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 A0A1W2PQD3 144 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 TCRBV9S1A1TA0A576 114 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 DPRXA6NFQ7 191 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 OR5H1A6NKK0 313 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 SNTNA6NMZ2 147 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 B4DSR2 109 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 TRIM49D1C9J1S8 452 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 DCTN6O00399 190 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 GPR171O14626 319 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 ABCD4O14678 606 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 EIF3HO15372 352 aaKnown RBP eCLIP2.64□□□□□ -1.99
HERC1-215ENST00000561436 TIMM8AO60220 97 aaPredicted RBP2.64□□□□□ -1.99
HERC1-215ENST00000561436 FCMRO60667 390 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 RAMP3O60896 148 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 AQP8O94778 261 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 LGI1O95970 557 aa2.64□□□□□ -1.99
HERC1-215ENST00000561436 GGT1P19440 569 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms