RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 METTL11BQ5VVY1 283 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 TMEM42Q69YG0 159 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 STUMQ69YW2 141 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 FDX2Q6P4F2 183 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 RBMS3Q6XE24 437 aaKnown RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 BRD3OSQ6XYD6 125 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 ACP7Q6ZNF0 438 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 C1QL2Q7Z5L3 287 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 EGFL6Q8IUX8 553 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 FAM185AQ8N0U4 392 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 ASCC1Q8N9N2 400 aaKnown RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 PNLDC1Q8NA58 520 aaKnown RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 POC1AQ8NBT0 407 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 CCDC54Q8NEL0 328 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 ZNF418Q8TF45 676 aaPredicted RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 TFAP2CQ92754 450 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 EMG1Q92979 244 aaKnown RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 ITFG2Q969R8 447 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 MED30Q96HR3 178 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 CNBD2Q96M20 576 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 OPALINQ96PE5 141 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 GAFA1Q96PS6 74 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 MDFIQ99750 246 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 CCDC90BQ9GZT6 254 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 FAM192AQ9GZU8 254 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 ZCCHC4Q9H5U6 513 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 TNFRSF19Q9NS68 423 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 MRPS18AQ9NVS2 196 aaKnown RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 BABAM2Q9NXR7 383 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 SCN3BQ9NY72 215 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 IGKV1-27A0A075B6S5 117 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 PPIAL4CA0A0B4J2A2 164 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 A0A1W2PPK0 400 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 A0A1W2PRD5 423 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 A0A1W2PRF3 423 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 A0A1W2PRM7 423 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 SLC1A7O00341 560 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 MAGEB3O15480 346 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 FSTL3O95633 263 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 ATP6V1G2O95670 118 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 ISG15P05161 165 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 PGA5P0DJD9 388 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 PPIAL4GP0DN37 164 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 TMEM225BP0DP42 221 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 PIPP12273 146 aaPredicted RBP8.39□□□□□ -1.07
HERC1-212ENST00000561348 AMY2BP19961 511 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 PRDX2P32119 198 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 CFHR2P36980 270 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 DGUOKQ16854 277 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 RPL22L1Q6P5R6 122 aaKnown RBP8.39□□□□□ -1.07
HERC1-212ENST00000561348 SERPINA12Q8IW75 414 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 BCL6BQ8N143 479 aaPredicted RBP8.39□□□□□ -1.07
HERC1-212ENST00000561348 OR4M1Q8NGD0 313 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 OR5D14Q8NGL3 314 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 OR13C5Q8NGS8 318 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 ANGPTL6Q8NI99 470 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 LHX4Q969G2 390 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 C12orf43Q96C57 262 aaKnown RBP8.39□□□□□ -1.07
HERC1-212ENST00000561348 ORAI1Q96D31 301 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 CEP19Q96LK0 163 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 DUX5Q96PT3 197 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 NKX3-1Q99801 234 aaPredicted RBP8.39□□□□□ -1.07
HERC1-212ENST00000561348 ZNF649Q9BS31 505 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 ING3Q9NXR8 418 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 TAS2R4Q9NYW5 299 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 ZNF69Q9UC07 566 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 NUP50Q9UKX7 468 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 ERGIC3Q9Y282 383 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 SOX21Q9Y651 276 aaPredicted RBP8.39□□□□□ -1.07
HERC1-212ENST00000561348 SIRT4Q9Y6E7 314 aaPredicted RBP8.39□□□□□ -1.07
HERC1-212ENST00000561348 SVEP1Q4LDE5 3571 aa8.39□□□□□ -1.07
HERC1-212ENST00000561348 IGKV1D-17A0A075B6S4 117 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 IGKV1-9A0A0C4DH69 117 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 ZNF879B4DU55 563 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 F8VVB4 439 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 F8VWA3 439 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 TNFRSF13BO14836 293 aaPredicted RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 ECDO95905 644 aaPredicted RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 LALBAP00709 142 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 CD2P06729 351 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 ACAA1P09110 424 aaPredicted RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 PRKACAP17612 351 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 RAB3AP20336 220 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 BCL3P20749 454 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 CPT2P23786 658 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 EEF1B2P24534 225 aaKnown RBP8.38□□□□□ -1.07
HERC1-212ENST00000561348 NPBWR2P48146 333 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 TGM4P49221 684 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 DLX1P56177 255 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 PPP3R1P63098 170 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 PAX8Q06710 450 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 IL24Q13007 206 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 EDDM3AQ14507 147 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 CDK5R1Q15078 307 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 C6orf141Q5SZD1 244 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 GPR157Q5UAW9 335 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 RUSC1-AS1Q66K80 236 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 LAIR2Q6ISS4 152 aa8.38□□□□□ -1.07
HERC1-212ENST00000561348 FIP1L1Q6UN15 594 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms