RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 UGT3A2Q3SY77 523 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 CFAP157Q5JU67 520 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 CEP85LQ5SZL2 805 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 MINOS1Q5TGZ0 78 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 TMEM268Q5VZI3 342 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 OTPQ5XKR4 325 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 DGAT2L7PQ6IED9 249 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 CAVIN1Q6NZI2 390 aaKnown RBP2.79□□□□□ -1.96
HERC1-211ENST00000560983 BAIAP2L2Q6UXY1 529 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 CFAP77Q6ZQR2 320 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 NAA40Q86UY6 237 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 ANKRD46Q86W74 232 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 CATSPERDQ86XM0 798 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 C10orf53Q8N6V4 93 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 POC1AQ8NBT0 407 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 ZNRF1Q8ND25 227 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 OR4A15Q8NGL6 344 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 OR1F12Q8NHA8 337 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 BBS10Q8TAM1 723 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 MYOZ3Q8TDC0 251 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 ACTRT1Q8TDG2 376 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 SLC38A5Q8WUX1 472 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 ARPC1AQ92747 370 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 STMN2Q93045 179 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 TMEM106AQ96A25 262 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 APOBEC3DQ96AK3 386 aaPredicted RBP2.79□□□□□ -1.96
HERC1-211ENST00000560983 SLCO4A1Q96BD0 722 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 RAB3IPQ96QF0 476 aaPredicted RBP2.79□□□□□ -1.96
HERC1-211ENST00000560983 EPYCQ99645 322 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 TMEM43Q9BTV4 400 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 IFT27Q9BW83 186 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 SLC22A4Q9H015 551 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 GNB4Q9HAV0 340 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 POLE4Q9NR33 117 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 MARCOQ9UEW3 520 aaPredicted RBP2.79□□□□□ -1.96
HERC1-211ENST00000560983 APLNQ9ULZ1 77 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 AURKCQ9UQB9 309 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 SNX24Q9Y343 169 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 MINOS1-NBL1R4GNA1 71 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
HERC1-211ENST00000560983 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.96
HERC1-211ENST00000560983 IGKV1D-17A0A075B6S4 117 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 PRSS51A0A1B0GVH4 220 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 TMEM114B3SHH9 223 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 BLOC1S5-TXNDC5H3BN57 136 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 H3BQF6 201 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 M0QZK8 103 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 PGRMC1O00264 195 aaKnown RBP2.78□□□□□ -1.96
HERC1-211ENST00000560983 EIF3HO15372 352 aaKnown RBP eCLIP2.78□□□□□ -1.96
HERC1-211ENST00000560983 FMO6PO60774 539 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 PTP4A3O75365 173 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 LYPD3O95274 346 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 CNIH1O95406 144 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 CPSF4O95639 269 aaKnown RBP2.78□□□□□ -1.96
HERC1-211ENST00000560983 IGHG4P01861 327 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 TFAP2AP05549 437 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 TAC1P20366 129 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 MSR1P21757 451 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 PSMB8P28062 276 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 RPS6KA3P51812 740 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 GMFBP60983 142 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 RPL31P62899 125 aaKnown RBP2.78□□□□□ -1.96
HERC1-211ENST00000560983 CSNK2BP67870 215 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 SPIBQ01892 262 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 SCRN3Q0VDG4 424 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 GPR50Q13585 617 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 CASP8Q14790 479 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 OR1Q1Q15612 314 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 CXorf66Q5JRM2 361 aaPredicted RBP2.78□□□□□ -1.96
HERC1-211ENST00000560983 GPR139Q6DWJ6 353 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 C8orf74Q6P047 294 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 CALHM1Q8IU99 346 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 SLC22A9Q8IVM8 553 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 LRRC34Q8IZ02 419 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 CCNYL1Q8N7R7 359 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 C5orf56Q8N8D9 126 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 OR1M1Q8NGA1 313 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 OR4M1Q8NGD0 313 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 OR8J2Q8NGG1 315 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 OR13D1Q8NGV5 346 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 SPRYD4Q8WW59 207 aaPredicted RBP2.78□□□□□ -1.96
HERC1-211ENST00000560983 CAPSLQ8WWF8 208 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 SLC35A5Q9BS91 424 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 ADAT1Q9BUB4 502 aaKnown RBP2.78□□□□□ -1.96
HERC1-211ENST00000560983 TLNRD1Q9H1K6 362 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 GHITMQ9H3K2 345 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 EVA1AQ9H8M9 152 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 USE1Q9NZ43 259 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 RPS6KB2Q9UBS0 482 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 DNAJB9Q9UBS3 223 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.78□□□□□ -1.96
HERC1-211ENST00000560983 ZNF222Q9UK12 451 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 SLC13A4Q9UKG4 626 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 FBXO7Q9Y3I1 522 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 DNAJC15Q9Y5T4 150 aa2.78□□□□□ -1.96
HERC1-211ENST00000560983 A0A0G2JPF8 293 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 hCG_1809904A0A1W2PP81 198 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 A0A1W2PPE2 198 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 A0A1W2PR64 198 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 A0A1W2PRG6 482 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms