RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TMEM99Q8N816 258 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 TMEM104Q8NE00 496 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 OR2L3Q8NG85 312 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 OR8U1Q8NH10 309 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 OR4C6Q8NH72 309 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 TAAR8Q969N4 342 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 MRGPRFQ96AM1 343 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 OTUB2Q96DC9 234 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 CXorf40BQ96DE9 158 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF2Q9BSG1 426 aaPredicted RBP5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 ST6GALNAC5Q9BVH7 336 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 SRMSQ9H3Y6 488 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 CHST11Q9NPF2 352 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 C1orf123Q9NWV4 160 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 VPS29Q9UBQ0 182 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 GNG8Q9UK08 70 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 PIGLQ9Y2B2 252 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 TMEM265A0A087WTH1 108 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 TVP23AA6NH52 213 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 CCSO14618 274 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 COCHO43405 550 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 KDELR3O43731 214 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 GLSO94925 669 aaPredicted RBP5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 PPBPP02775 128 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 TRGC2P03986 189 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 CXCL1P09341 107 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 OR5AC1P0C628 307 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 TRGC1P0CF51 173 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 FOSL2P15408 326 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 DUSP1P28562 367 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 ELOBQ15370 118 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 PRAMEF17Q5VTA0 474 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 FBXL22Q6P050 247 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 NIPAL3Q6P499 406 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 SPRED2Q7Z698 418 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 SEMA6DQ8NFY4 1073 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 OR4K1Q8NGD4 311 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 SSMEM1Q8WWF3 244 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 DCUN1D4Q92564 292 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF503Q96F45 646 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 WFIKKN1Q96NZ8 548 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 ALKBH3Q96Q83 286 aaPredicted RBP5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 TBX5Q99593 518 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 WFDC6Q9BQY6 131 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 KCNG2Q9UJ96 466 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 RPH3ALQ9UNE2 315 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 ZFP30Q9Y2G7 519 aa5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 NOP16Q9Y3C1 178 aaKnown RBP5.88□□□□□ -1.47
TSPAN3-209ENST00000560715 RAMP2O60895 175 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 PSMB6P28072 239 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 CEACAM8P31997 349 aaPredicted RBP5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 BRS3P32247 399 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF385BQ569K4 471 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF585AQ6P3V2 769 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 RNF175Q8N4F7 328 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 ACOT4Q8N9L9 421 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 Q8WTZ3 238 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 GLYATL1Q969I3 302 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 SLC25A21Q9BQT8 299 aaPredicted RBP5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 FAAP24Q9BTP7 215 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 SCRT1Q9BWW7 348 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 RBM24Q9BX46 236 aaKnown RBP5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 RAB1BQ9H0U4 201 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 AMDHD2Q9Y303 409 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 CSAG2Q9Y5P2 127 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 NKX6-3A6NJ46 265 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 TMEM238C9JI98 176 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 ALOX12BO75342 701 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 AMBPP02760 352 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 GTF2F2P13984 249 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 IRF2P14316 349 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 FBLP22087 321 aaKnown RBP5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 SNCAP37840 140 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 IFNGR2P38484 337 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 TAS2R19P59542 299 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 DUSP5Q16690 384 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 SSX7Q7RTT5 188 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 GRASPQ7Z6J2 395 aaPredicted RBP5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 TMEM183AQ8IXX5 376 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 MMD2Q8IY49 270 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 D2HGDHQ8N465 521 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 MFSD9Q8NBP5 474 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 OR5AK3PQ8NH89 298 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 SLC38A5Q8WUX1 472 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 PSMG2Q969U7 264 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 PELI1Q96FA3 418 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 CIPCQ9C0C6 399 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 SLC2A8Q9NY64 477 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 OR5V1Q9UGF6 321 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 ST6GALNAC2Q9UJ37 374 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 HS3ST3B1Q9Y662 390 aa5.87□□□□□ -1.47
TSPAN3-209ENST00000560715 ANAPC1Q9H1A4 1944 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 KIR2DL5BA0A0G2JN68 375 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 KIR2DL5BA0A0G2JPC4 375 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 MGAT4DA6NG13 374 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 F5H5T6 163 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 J3QLW9 94 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 ZNF432O94892 652 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 RPN2P04844 631 aa5.86□□□□□ -1.47
TSPAN3-209ENST00000560715 ANXA4P09525 319 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms