RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 C3AR1Q16581 482 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 TMEM65Q6PI78 240 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 WDR54Q9H977 334 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 SEBOXQ9HB31 216 aaPredicted RBP11.98□□□□□ -0.49
TRAF3-208ENST00000560371 ADGRL4Q9HBW9 690 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 A0A1B0GVG6 124 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 SKP2Q13309 424 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 DCAF10Q5QP82 559 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 NHLRC1Q6VVB1 395 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 LOXL4Q96JB6 756 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 LRRC3BQ96PB8 259 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 THYN1Q9P016 225 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 TIMM9Q9Y5J7 89 aa11.98□□□□□ -0.49
TRAF3-208ENST00000560371 NME2P1O60361 137 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 HAGHQ16775 308 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 LRRC29Q8WV35 223 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 PLEKHA2Q9HB19 425 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 CD160O95971 181 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 DCTDP32321 178 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 ASAH1Q13510 395 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 GPNMBQ14956 572 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 MBD1Q9UIS9 605 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF835Q9Y2P0 537 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 CDK2AP1O14519 115 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 RAB7AP51149 207 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 MLF1P58340 268 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 TRAT1Q6PIZ9 186 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 OR52N4Q8NGI2 321 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 TCEAL7Q9BRU2 100 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 CXXC4Q9H2H0 198 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 CTLA4P16410 223 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 Q56UQ5 140 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF441Q8N8Z8 693 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 VSTM2LQ96N03 204 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 SIRT3Q9NTG7 399 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-208ENST00000560371 FKBP11Q9NYL4 201 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 MPGP29372 298 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 CDKN2AP42771 156 aaKnown RBP11.97□□□□□ -0.49
TRAF3-208ENST00000560371 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 PTPRFP10586 1907 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 H3BP45 60 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 ZFPL1O95159 310 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 SULT1A3P0DMM9 295 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 SULT1A4P0DMN0 295 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 MAMSTRQ6ZN01 415 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 MOB1BQ7L9L4 216 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 ADGRG7Q96K78 797 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 ZNF416Q9BWM5 594 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 CYSLTR2Q9NS75 346 aa11.97□□□□□ -0.49
TRAF3-208ENST00000560371 FGF7P21781 194 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 S100A4P26447 101 aaKnown RBP11.96□□□□□ -0.49
TRAF3-208ENST00000560371 SNRPNP63162 240 aaKnown RBP11.96□□□□□ -0.49
TRAF3-208ENST00000560371 ARRDC1Q8N5I2 433 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 WDR31Q8NA23 367 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 ZFP62Q8NB50 900 aaPredicted RBP11.96□□□□□ -0.49
TRAF3-208ENST00000560371 GPR32P1Q8NGA4 272 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 TVP23CQ96ET8 276 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 MISP3Q96FF7 219 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 RBP4P02753 201 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 ZIC1Q15915 447 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 TMEM128Q5BJH2 165 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 TUSC5Q8IXB3 177 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 OR6S1Q8NH40 331 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 ERRFI1Q9UJM3 462 aaPredicted RBP11.96□□□□□ -0.49
TRAF3-208ENST00000560371 ARL2-SNX15V9GYD0 113 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 LRRC3CA6NJW4 275 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 DEFB108AA8MXU0 73 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 OPRK1P41145 380 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.49
TRAF3-208ENST00000560371 ISXQ2M1V0 245 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 SLC25A35Q3KQZ1 300 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 RNF165Q6ZSG1 346 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 SSX7Q7RTT5 188 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 OR4C16Q8NGL9 310 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 AAMDCQ9H7C9 122 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 V9GYS6 101 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 A0A1W2PPC1 479 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 LALBAP00709 142 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 FTH1P19P0C7X4 201 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 RRASP10301 218 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 SLC37A1P57057 533 aa11.96□□□□□ -0.49
TRAF3-208ENST00000560371 TNS1Q9HBL0 1735 aaKnown RBP11.96□□□□□ -0.5
TRAF3-208ENST00000560371 LCTP09848 1927 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 FBP1P09467 338 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 CCL3P10147 92 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 BRS3P32247 399 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 PTTG1IPP53801 180 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 CDH26Q8IXH8 852 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 ABHD3Q8WU67 409 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 ARHGAP5-AS1Q96IT6 56 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 C2orf50Q96LR7 162 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 PCOLCE2Q9UKZ9 415 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 ICAM5Q9UMF0 924 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 AKR7A2O43488 359 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 CYTIPO60759 359 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 MDH2P40926 338 aaKnown RBP11.96□□□□□ -0.5
TRAF3-208ENST00000560371 C20orf196Q8IYI0 205 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 OR2M7Q8NG81 312 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 TSPAN32Q96QS1 320 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms