RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 NOP16Q9Y3C1 178 aaKnown RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 IGLV3-9A0A075B6K5 115 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 SPRY1O43609 319 aaPredicted RBP9.57□□□□□ -0.88
USP3-218ENST00000560202 SLC22A5O76082 557 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 PLATP00750 562 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 CD3EP07766 207 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 RAB6AP20340 208 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 PITPNBP48739 271 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 SELENOVP59797 346 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 RRAS2P62070 204 aaPredicted RBP9.57□□□□□ -0.88
USP3-218ENST00000560202 PDZK1IP1Q13113 114 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 OR8G1Q15617 311 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 SLC22A6Q4U2R8 563 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 BEX5Q5H9J7 111 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 ASCL4Q6XD76 172 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 Q6ZR03 302 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 OR2W3Q7Z3T1 314 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 CDH24Q86UP0 819 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 CALHM1Q8IU99 346 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 DMRTC2Q8IXT2 367 aaPredicted RBP9.57□□□□□ -0.88
USP3-218ENST00000560202 C19orf18Q8NEA5 215 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 KCNG3Q8TAE7 436 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 FAM46BQ96A09 425 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 MRPL24Q96A35 216 aaKnown RBP9.57□□□□□ -0.88
USP3-218ENST00000560202 SYT3Q9BQG1 590 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 MARVELD1Q9BSK0 173 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 RTL8AQ9BWD3 113 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 MRPL37Q9BZE1 423 aaKnown RBP9.57□□□□□ -0.88
USP3-218ENST00000560202 C11orf54Q9H0W9 315 aaPredicted RBP9.57□□□□□ -0.88
USP3-218ENST00000560202 NARFLQ9H6Q4 476 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 ZNF442Q9H7R0 627 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 ELL3Q9HB65 397 aaPredicted RBP9.57□□□□□ -0.88
USP3-218ENST00000560202 GLS2Q9UI32 602 aa9.57□□□□□ -0.88
USP3-218ENST00000560202 ADGRG4Q8IZF6 3080 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 A0A1B0GWJ7 208 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 A8MV72 311 aaPredicted RBP9.56□□□□□ -0.88
USP3-218ENST00000560202 SHISA9B4DS77 424 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 H0YL77 283 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 MLNRO43193 412 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 ANGPTL7O43827 346 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 CTAG2O75638 210 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 CSF3P09919 207 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 HAAOP46952 286 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 TATDN3Q17R31 274 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 PYDC2Q56P42 97 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 BIVMQ86UB2 503 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 ZNF573Q86YE8 665 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 IZUMO1Q8IYV9 350 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 ZNF611Q8N823 705 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 ZSCAN4Q8NAM6 433 aaPredicted RBP9.56□□□□□ -0.88
USP3-218ENST00000560202 TMEM104Q8NE00 496 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 PXT1Q8NFP0 134 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 OR4M2Q8NGB6 313 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 OR13G1Q8NGZ3 307 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 OR51F2Q8NH61 342 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 CREB3L1Q96BA8 519 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 CST11Q9H112 138 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 METTL9Q9H1A3 318 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 ATG5Q9H1Y0 275 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 PPA2Q9H2U2 334 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 MSL2Q9HCI7 577 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 RABL2BQ9UNT1 228 aa9.56□□□□□ -0.88
USP3-218ENST00000560202 MRPS7Q9Y2R9 242 aaKnown RBP9.56□□□□□ -0.88
USP3-218ENST00000560202 IGKV1-12A0A0C4DH73 117 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.55□□□□□ -0.88
USP3-218ENST00000560202 A0A1W2PP11 408 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 METTL21EPA6NDL7 271 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 VSTM5A8MXK1 200 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 SIAH2O43255 324 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 CDC14BO60729 498 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 CRTAPO75718 401 aaPredicted RBP9.55□□□□□ -0.88
USP3-218ENST00000560202 MPIG6BO95866 241 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 IFNA7P01567 189 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 IGKV1D-12P01611 117 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 C4BPBP20851 252 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 CDK2P24941 298 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 KIR2DL3P43628 341 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 GPR176Q14439 515 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 ADIPOQQ15848 244 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 FAM76BQ5HYJ3 339 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 HACD4Q5VWC8 232 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 TRIQKQ629K1 86 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 PYHIN1Q6K0P9 492 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 HAGHLQ6PII5 290 aaPredicted RBP9.55□□□□□ -0.88
USP3-218ENST00000560202 BAIAP2L2Q6UXY1 529 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 SLC25A26Q70HW3 274 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 OR10AD1Q8NGE0 317 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 OR10K1Q8NGX5 313 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 PHF21AQ96BD5 680 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 GAL3ST1Q99999 423 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 MMP28Q9H239 520 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 CXXC4Q9H2H0 198 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 OR51I2Q9H344 312 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 BANF2Q9H503 90 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 TAAR3PQ9P1P4 343 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 RNF115Q9Y4L5 304 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 HSPB11Q9Y547 144 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 PLSCR5A0PG75 271 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 TMEM210A6NLX4 147 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 DEFB108AA8MXU0 73 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms