RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 FUT9Q9Y231 359 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 RFNGQ9Y644 331 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 A0A1B0GWA3 101 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 FIGNL2A6NMB9 653 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 CD55P08174 381 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 STPG4Q8N801 248 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 PGAM5Q96HS1 289 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 ZNF514Q96K75 400 aaPredicted RBP16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 NRTNQ99748 197 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 WWTR1Q9GZV5 400 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 PRO3102Q9H379 93 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 A0A0B4J2E0 115 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 A0A1B0GX12 115 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 SPINT1O43278 529 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 LRRC69Q6ZNQ3 347 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 DPY19L4Q7Z388 723 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 NECAP1Q8NC96 275 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 OR4C5Q8NGB2 326 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 OR5L2Q8NGL0 311 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 PTX4Q96A99 478 aa16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 SRA1Q9HD15 236 aaKnown RBP16.86■□□□□ 0.29
SEMA4B-215ENST00000560089 EDDM13A0A1B0GTR0 161 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 CEACAM18A8MTB9 384 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 KNG1P01042 644 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 CDKN2AP42771 156 aaKnown RBP16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 ERVS71-1P61550 626 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 ZNF619Q8N2I2 560 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 OR2I1PQ8NGU4 316 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 PPP1R14AQ96A00 147 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 SLC25A44Q96H78 314 aaPredicted RBP16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 CTDSP1Q9GZU7 261 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 RBKSQ9H477 322 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 FAM221AA4D161 298 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 C2CD4DB7Z1M9 353 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 K7ESM1 405 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 LDB3O75112 727 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 IFNA21P01568 189 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 RPL19P84098 196 aaKnown RBP16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 ELAVL3Q14576 367 aaKnown RBP16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 GRINAQ7Z429 371 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 OR4D6Q8NGJ1 314 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 PELI2Q9HAT8 420 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 RNF24Q9Y225 148 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 MYO15AQ9UKN7 3530 aa16.85■□□□□ 0.29
SEMA4B-215ENST00000560089 DOCK9Q9BZ29 2069 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 GOLGA4Q13439 2230 aaKnown RBP16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 FAM230AA0A1W2PPH8 454 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 XRCC2O43543 280 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 BMI1P35226 326 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 TMPRSS7Q7RTY8 843 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 RTN4RL2Q86UN3 420 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 CLDND2Q8NHS1 167 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 IL22RA2Q969J5 263 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 APOBEC3BQ9UH17 382 aaKnown RBP16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 CXorf51AA0A1B0GTR3 108 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 PRNPP04156 253 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 ZNF41P51814 821 aaPredicted RBP16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 PSG6Q00889 435 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 IL24Q13007 206 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 ACOT6Q3I5F7 207 aaPredicted RBP16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 VAX1Q5SQQ9 334 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 VAMP8Q9BV40 100 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 SERGEFQ9UGK8 458 aa16.84■□□□□ 0.29
SEMA4B-215ENST00000560089 ARPC3O15145 178 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 TRAPPC6AO75865 159 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 ALOX5APP20292 161 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 PSMB5P28074 263 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 REEP5Q00765 189 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 MPV17LQ2QL34 196 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 NUP54Q7Z3B4 507 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 TGIF2LYQ8IUE0 185 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 THAP10Q9P2Z0 257 aaPredicted RBP16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 ZNF780BQ9Y6R6 833 aa16.83■□□□□ 0.29
SEMA4B-215ENST00000560089 TRAV39A0A0B4J263 110 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 K7EQS6 105 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 ASCL1P50553 236 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 ZFP36L1Q07352 338 aaKnown RBP16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 GPR157Q5UAW9 335 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 FAM90A2PQ658T7 463 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 SLC48A1Q6P1K1 146 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 TEX43Q6ZNM6 134 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 IL22RA1Q8N6P7 574 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 ASB5Q8WWX0 329 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 RNF2Q99496 336 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 MACROD1Q9BQ69 325 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 WDR76Q9H967 626 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 CD207Q9UJ71 328 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 TMEM225BP0DP42 221 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 DNASE1L1P49184 302 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 FAM3BP58499 235 aaPredicted RBP16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 LINC01551Q86U37 167 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 OR10S1Q8NGN2 331 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 PYGO2Q9BRQ0 406 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 ZNF552Q9H707 407 aaPredicted RBP16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 FBXO34Q9NWN3 711 aa16.83■□□□□ 0.28
SEMA4B-215ENST00000560089 KIAA1549LQ6ZVL6 1849 aa16.82■□□□□ 0.28
SEMA4B-215ENST00000560089 PFN1P07737 140 aaKnown RBP16.82■□□□□ 0.28
SEMA4B-215ENST00000560089 JMJD7P0C870 316 aa16.82■□□□□ 0.28
SEMA4B-215ENST00000560089 TMEM123Q8N131 208 aa16.82■□□□□ 0.28
SEMA4B-215ENST00000560089 OR5H2Q8NGV7 314 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms