RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ISL1P61371 349 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 OR2T27Q8NH04 317 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 SLAMF9Q96A28 289 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 CITED1Q99966 193 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 RASL12Q9NYN1 266 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 RNF114Q9Y508 228 aa14.45□□□□□ -0.1
HDDC3-205ENST00000559898 ANKRD61A6NGH8 418 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 H0YAE9 185 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 EI24O14681 340 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 ANGPTL7O43827 346 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 FBP1P09467 338 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 FCGR1AP12314 374 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 PROK1P58294 105 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 NANOS3P60323 173 aaKnown RBP14.44□□□□□ -0.1
HDDC3-205ENST00000559898 C1orf122Q6ZSJ8 110 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 ZNF573Q86YE8 665 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 DYNAPQ8N1N2 210 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 ZSCAN4Q8NAM6 433 aaPredicted RBP14.44□□□□□ -0.1
HDDC3-205ENST00000559898 OR10AC1Q8NH08 325 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 PPP1R35Q8TAP8 253 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 DMRTB1Q96MA1 342 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 METTL8Q9H825 291 aaKnown RBP14.44□□□□□ -0.1
HDDC3-205ENST00000559898 GNG8Q9UK08 70 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 SIGLEC9Q9Y336 463 aa14.44□□□□□ -0.1
HDDC3-205ENST00000559898 IGKV1-9A0A0C4DH69 117 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 LOC107986453A0A1B0GWG9 222 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 J3QRE1 110 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 SYT7O43581 403 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 CIB2O75838 187 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 ALPLP05186 524 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 COX7A1P24310 79 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 EEF1B2P24534 225 aaKnown RBP14.43□□□□□ -0.1
HDDC3-205ENST00000559898 DLX6P56179 175 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 RPL31P62899 125 aaKnown RBP14.43□□□□□ -0.1
HDDC3-205ENST00000559898 GUCA2AQ02747 115 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 COL10A1Q03692 680 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 LY6EQ16553 131 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 SMIM21Q3B7S5 101 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 LDLRAD2Q5SZI1 272 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 BRICD5Q6PL45 260 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 ZNF782Q6ZMW2 699 aaPredicted RBP14.43□□□□□ -0.1
HDDC3-205ENST00000559898 TCF23Q7RTU1 214 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 LHFPL4Q7Z7J7 247 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 OR8J1Q8NGP2 316 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 ADAT3Q96EY9 351 aaPredicted RBP14.43□□□□□ -0.1
HDDC3-205ENST00000559898 MBOAT4Q96T53 435 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 VPREB3Q9UKI3 123 aa14.43□□□□□ -0.1
HDDC3-205ENST00000559898 H3BUX3 64 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 TK1P04183 234 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 NPBWR2P48146 333 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 OR12D2P58182 307 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 ACTR3P61158 418 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 ASPHD2Q6ICH7 369 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 C17orf107Q6ZR85 190 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 RBM4BQ9BQ04 359 aaKnown RBP14.42□□□□□ -0.1
HDDC3-205ENST00000559898 PPA2Q9H2U2 334 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 DPAGT1Q9H3H5 408 aa14.42□□□□□ -0.1
HDDC3-205ENST00000559898 TRBV23-1A0A0A0MS06 115 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 TMEM82A0PJX8 343 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 DHRS7CA6NNS2 312 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 ZNF737O75373 536 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 SULT1C4O75897 302 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 JUNBP17275 347 aaPredicted RBP14.41□□□□□ -0.1
HDDC3-205ENST00000559898 DUSP1P28562 367 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 ATP6V1E1P36543 226 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 IL24Q13007 206 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 NCR3LG1Q68D85 454 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 CRIP3Q6Q6R5 217 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 SLC25A26Q70HW3 274 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 ZNF561Q8N587 486 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 TPRX1Q8N7U7 411 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 BEND2Q8NDZ0 799 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 OR51A4Q8NGJ6 313 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 PIFOQ8TCI5 191 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 RNFT2Q96EX2 444 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 PKIBQ9C010 78 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 CHST5Q9GZS9 411 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 FRRS1LQ9P0K9 344 aa14.41□□□□□ -0.1
HDDC3-205ENST00000559898 WNK1Q9H4A3 2382 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 A0A1B0GUS0 222 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 SLC1A7O00341 560 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 CLPXO76031 633 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 PAHP00439 452 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 IGHA1P01876 353 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 SNU13P55769 128 aaKnown RBP14.4□□□□□ -0.1
HDDC3-205ENST00000559898 CDC42P60953 191 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 PLA1AQ53H76 456 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 DHRS7BQ6IAN0 325 aaPredicted RBP14.4□□□□□ -0.1
HDDC3-205ENST00000559898 SLC35E4Q6ICL7 350 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 GDPGP1Q6ZNW5 385 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 CBR4Q8N4T8 237 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 ASCC1Q8N9N2 400 aaKnown RBP14.4□□□□□ -0.1
HDDC3-205ENST00000559898 OR52N4Q8NGI2 321 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 OR2G2Q8NGZ5 317 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 ITFG2Q969R8 447 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 RFT1Q96AA3 541 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 HRASLS5Q96KN8 279 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 SPACA5Q96QH8 159 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 SLC29A1Q99808 456 aa14.4□□□□□ -0.1
HDDC3-205ENST00000559898 SSX3Q99909 188 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms