RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 DIRC2Q96SL1 478 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 CXorf56Q9H5V9 222 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 DIABLOQ9NR28 239 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 POLDIP2Q9Y2S7 368 aa10.33□□□□□ -0.76
HERC1-205ENST00000559886 A0A0G2JMP0 313 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 A0A0X1KG70 313 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 TPPPO94811 219 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 ACAA1P09110 424 aaPredicted RBP10.32□□□□□ -0.76
HERC1-205ENST00000559886 BCL3P20749 454 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 MPPED2Q15777 294 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 PRAMEF6Q5VXH4 476 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 FAM89BQ8N5H3 189 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 OR4M2Q8NGB6 313 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 FBXW5Q969U6 566 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 PHF21AQ96BD5 680 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 MEGF10Q96KG7 1140 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 GAL3ST1Q99999 423 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 URM1Q9BTM9 101 aaKnown RBP10.32□□□□□ -0.76
HERC1-205ENST00000559886 TM2D1Q9BX74 207 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 SELENOIQ9C0D9 397 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 SRRQ9GZT4 340 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 RABL2AQ9UBK7 228 aaPredicted RBP10.32□□□□□ -0.76
HERC1-205ENST00000559886 IL19Q9UHD0 177 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 RABL2BQ9UNT1 228 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 RAI1Q7Z5J4 1906 aaPredicted RBP10.32□□□□□ -0.76
HERC1-205ENST00000559886 A0A1W2PPR1 153 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 F8VVB4 439 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 F8VWA3 439 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 TRAPPC2LH3BP13 241 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 RAB27BO00194 218 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 CD55P08174 381 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 TNFSF4P23510 183 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 MNDAP41218 407 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 PTH2RP49190 550 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 SRP9P49458 86 aaKnown RBP10.32□□□□□ -0.76
HERC1-205ENST00000559886 TMEM69Q5SWH9 247 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 RAB12Q6IQ22 244 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 IZUMO1Q8IYV9 350 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 FBXL14Q8N1E6 418 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 OSR2Q8N2R0 312 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 Q96M66 194 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 ABHD1Q96SE0 405 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 SDHCQ99643 169 aaPredicted RBP10.32□□□□□ -0.76
HERC1-205ENST00000559886 NICN1Q9BSH3 213 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
HERC1-205ENST00000559886 A0A0A6YYD4 124 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 SCGNO76038 276 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 CHRM2P08172 466 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 PGA5P0DJD9 388 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 GATA4P43694 442 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 ERVK11-1P61568 191 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 TNFAIP6P98066 277 aaPredicted RBP10.31□□□□□ -0.76
HERC1-205ENST00000559886 MOGAT2Q3SYC2 334 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 SPRNQ5BIV9 151 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 PYHIN1Q6K0P9 492 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 BORCS5Q969J3 196 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 NUDT16L1Q9BRJ7 211 aaKnown RBP10.31□□□□□ -0.76
HERC1-205ENST00000559886 MS4A5Q9H3V2 200 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 UFSP2Q9NUQ7 469 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 RBFOX1Q9NWB1 397 aaKnown RBP10.31□□□□□ -0.76
HERC1-205ENST00000559886 MRPS7Q9Y2R9 242 aaKnown RBP10.31□□□□□ -0.76
HERC1-205ENST00000559886 DYSFO75923 2080 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 FAM221AA4D161 298 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 A6NLC8 198 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 HS3ST1O14792 307 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 NOS1APO75052 506 aaPredicted RBP10.31□□□□□ -0.76
HERC1-205ENST00000559886 HLA-DQB1P01920 261 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 CPT2P23786 658 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 VEGFCP49767 419 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 TAS2R20P59543 309 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 FGF12P61328 243 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 FAM209AQ5JX71 171 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 WDR82Q6UXN9 313 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 ZNF826PQ6ZT77 177 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 Q8IYB0 196 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 GDPD1Q8N9F7 314 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 OR56B1Q8NGI3 324 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 OR51T1Q8NGJ9 327 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 ITLN1Q8WWA0 313 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 ZNF488Q96MN9 340 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 DYNLRB1Q9NP97 96 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 LRBAP50851 2863 aa10.31□□□□□ -0.76
HERC1-205ENST00000559886 AKR7A2O43488 359 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 CLDN1O95832 211 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 RBM11P57052 281 aaKnown RBP10.3□□□□□ -0.76
HERC1-205ENST00000559886 PITPNAQ00169 270 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 PYDC2Q56P42 97 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 NHLRC3Q5JS37 347 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 BATF2Q8N1L9 274 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 ZCCHC24Q8N2G6 241 aaKnown RBP10.3□□□□□ -0.76
HERC1-205ENST00000559886 POC1AQ8NBT0 407 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 OR10R2Q8NGX6 335 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 ZFAND2BQ8WV99 257 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 NRIP2Q9BQI9 281 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 ST3GAL6Q9Y274 331 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 TRAV18A0A075B6X5 111 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 FOXI3A8MTJ6 420 aaPredicted RBP10.3□□□□□ -0.76
HERC1-205ENST00000559886 CTDSPLO15194 276 aa10.3□□□□□ -0.76
HERC1-205ENST00000559886 SOCS1O15524 211 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms