RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 RPS4Y2Q8TD47 263 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 CHID1Q9BWS9 393 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 MMP28Q9H239 520 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 C1orf21Q9H246 121 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 MOB1AQ9H8S9 216 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 PITPNC1Q9UKF7 332 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 POLDIP2Q9Y2S7 368 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 TMEM14AQ9Y6G1 99 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 SORL1Q92673 2214 aa10.57□□□□□ -0.72
TPM1-220ENST00000559556 PQLC2LA1A4F0 135 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 DHRS7CA6NNS2 312 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 K7N7A8 449 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 DLGAP1O14490 977 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 RRP9O43818 475 aaKnown RBP10.56□□□□□ -0.72
TPM1-220ENST00000559556 E2F6O75461 281 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 RIDAP52758 137 aaKnown RBP10.56□□□□□ -0.72
TPM1-220ENST00000559556 ERVK11-1P61568 191 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 CLVS2Q5SYC1 327 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 LDLRAD2Q5SZI1 272 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 ZNF626Q68DY1 528 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 Q6ZSR3 168 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 HS3ST5Q8IZT8 346 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 OR4F17Q8NGA8 305 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 MRAPQ8TCY5 172 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 ASB17Q8WXJ9 295 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 PHF21AQ96BD5 680 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 CCDC124Q96CT7 223 aaKnown RBP10.56□□□□□ -0.72
TPM1-220ENST00000559556 MALSU1Q96EH3 234 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 LRGUKQ96M69 825 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 OR4F4Q96R69 305 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 WNT10AQ9GZT5 417 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 ZNF556Q9HAH1 456 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 NECAP2Q9NVZ3 263 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 OR14J1Q9UGF5 321 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 COPS3Q9UNS2 423 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 V9GYS6 101 aa10.56□□□□□ -0.72
TPM1-220ENST00000559556 ARG1P05089 322 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 MRPL3P09001 348 aaKnown RBP10.55□□□□□ -0.72
TPM1-220ENST00000559556 ZNF728P0DKX0 622 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 PIPP12273 146 aaPredicted RBP10.55□□□□□ -0.72
TPM1-220ENST00000559556 ANXA8P13928 327 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 HOXB6P17509 224 aaKnown RBP10.55□□□□□ -0.72
TPM1-220ENST00000559556 RAB13P51153 203 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 DYNLT3P51808 116 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 LOXL3P58215 753 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 PLA1AQ53H76 456 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 TMEM236Q5W0B7 351 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 TMEM219Q86XT9 240 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 OR11H6Q8NGC7 330 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 OR13D1Q8NGV5 346 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 CANT1Q8WVQ1 401 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 R3HDM4Q96D70 268 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 NSL1Q96IY1 281 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 CITED2Q99967 270 aaPredicted RBP10.55□□□□□ -0.72
TPM1-220ENST00000559556 TEX12Q9BXU0 123 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 TTTY10Q9BZA0 68 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 PRSS22Q9GZN4 317 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 ABCB10Q9NRK6 738 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 GPR173Q9NS66 373 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 AURKAIP1Q9NWT8 199 aaPredicted RBP10.55□□□□□ -0.72
TPM1-220ENST00000559556 DNAJB9Q9UBS3 223 aa10.55□□□□□ -0.72
TPM1-220ENST00000559556 A0A1B0GTI1 187 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 LOC110117498-PIK3R3F6TDL0 507 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 GNGT2O14610 69 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 ZNF737O75373 536 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 IGHV1-8P0DP01 117 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 COL10A1Q03692 680 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 IL24Q13007 206 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 SSX2Q16385 188 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 SNAPC1Q16533 368 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 BCL2L15Q5TBC7 163 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 ASRGL1Q7L266 308 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 ELMOD2Q8IZ81 293 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 ASCC1Q8N9N2 400 aaKnown RBP10.54□□□□□ -0.72
TPM1-220ENST00000559556 SGCDQ92629 289 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 CNN2Q99439 309 aaKnown RBP10.54□□□□□ -0.72
TPM1-220ENST00000559556 PKIBQ9C010 78 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.54□□□□□ -0.72
TPM1-220ENST00000559556 IKZF2Q9UKS7 526 aa10.54□□□□□ -0.72
TPM1-220ENST00000559556 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.54□□□□□ -0.72
TPM1-220ENST00000559556 DNAH7Q8WXX0 4024 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 AQP12BA6NM10 295 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 PRKACGP22612 351 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 CALB2P22676 271 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 ESRRGP62508 458 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 ZNF322Q6U7Q0 402 aaPredicted RBP10.53□□□□□ -0.72
TPM1-220ENST00000559556 AQP12AQ8IXF9 295 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 OR8H2Q8N162 312 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 BATF2Q8N1L9 274 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 OR14K1Q8NGZ2 314 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 DNAJC9Q8WXX5 260 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 TVP23BQ9NYZ1 205 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 GTF2A1LQ9UNN4 478 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 SLC22A13Q9Y226 551 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 R4GMQ9 66 aa10.53□□□□□ -0.72
TPM1-220ENST00000559556 F2RL2O00254 374 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 EBAG9O00559 213 aa10.52□□□□□ -0.73
TPM1-220ENST00000559556 PEX14O75381 377 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms