RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PCDHGB5Q9Y5G0 923 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 KPTNQ9Y664 436 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 YLPM1P49750 1951 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 TRBV23-1A0A0A0MS06 115 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 BTBD17A6NE02 478 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 EFCAB10A6NFE3 127 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ERICH4A6NGS2 130 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 C22orf46C9J442 243 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ANKRD65E5RJM6 399 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 MYL12BO14950 172 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CASQ2O14958 399 aaPredicted RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 ZFPL1O95159 310 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CLIC3O95833 236 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 PLATP00750 562 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 KNG1P01042 644 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CRYBA1P05813 215 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CHRM2P08172 466 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 HCKP08631 526 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 PGA5P0DJD9 388 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 PSG2P11465 335 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 MPZP25189 248 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 PRDX2P32119 198 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CAPGP40121 348 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 TGM4P49221 684 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 POU3F4P49335 361 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 TAS2R43P59537 309 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 NANOS3P60323 173 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 RPL31P62899 125 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 PPP3R1P63098 170 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 SLC34A1Q06495 639 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 BAMBIQ13145 260 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 OGFRL1Q5TC84 451 aaPredicted RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 NCR3LG1Q68D85 454 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 RPL22L1Q6P5R6 122 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 ACP7Q6ZNF0 438 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ZNF788Q6ZQV5 615 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 C1orf122Q6ZSJ8 110 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 C9orf139Q6ZV77 190 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 SLC25A26Q70HW3 274 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 GDPD3Q7L5L3 318 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ANGPTL5Q86XS5 388 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CALHM1Q8IU99 346 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 PHC2Q8IXK0 858 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 STX19Q8N4C7 294 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 KIR3DL3Q8N743 410 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ZSCAN4Q8NAM6 433 aaPredicted RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 ZNRF1Q8ND25 227 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 OR51A4Q8NGJ6 313 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 OR52I1Q8NGK6 324 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 OR5D13Q8NGL4 314 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 PPP1R35Q8TAP8 253 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CNIH3Q8TBE1 160 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 GPR148Q8TDV2 347 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 NPRL2Q8WTW4 380 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 FAM216AQ8WUB2 273 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 TSEN15Q8WW01 171 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 APH1BQ8WW43 257 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 EMG1Q92979 244 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 FGGYQ96C11 551 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 SEH1LQ96EE3 360 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 TMEM80Q96HE8 168 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 OPALINQ96PE5 141 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 S100A13Q99584 98 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 NRIP2Q9BQI9 281 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 DCTN5Q9BTE1 182 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 JAM3Q9BX67 310 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 FAM234AQ9H0X4 552 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ZCCHC4Q9H5U6 513 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 ISG20L2Q9H9L3 353 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 ZMAT3Q9HA38 289 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 RHOFQ9HBH0 211 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 NOX4Q9NPH5 578 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 BABAM2Q9NXR7 383 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 CKLFQ9UBR5 152 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 OR14J1Q9UGF5 321 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 DIMT1Q9UNQ2 313 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 ERGIC3Q9Y282 383 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 EXOSC1Q9Y3B2 195 aaKnown RBP3.62□□□□□ -1.83
SNX1-205ENST00000559339 FAM96BQ9Y3D0 163 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 CUBNO60494 3623 aa3.62□□□□□ -1.83
SNX1-205ENST00000559339 STAB1Q9NY15 2570 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 IGKV1D-17A0A075B6S4 117 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 IGHV3OR16-10A0A075B7F0 116 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 IGHV1-69DA0A0B4J2H0 117 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FUOMA2VDF0 154 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 OR4C45A6NMZ5 311 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 H0YJX3 145 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 CLDN34H7C241 214 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 M0R1W7 72 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SH2D1BO14796 132 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SULT1B1O43704 296 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 SYNGR1O43759 233 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 WBP4O75554 376 aaKnown RBP3.61□□□□□ -1.83
SNX1-205ENST00000559339 INMTO95050 263 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 ALX3O95076 343 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 VENTXO95231 258 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 PAHP00439 452 aa3.61□□□□□ -1.83
SNX1-205ENST00000559339 FSHBP01225 129 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms