RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 IGLV3-1P01715 115 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 RBP4P02753 201 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 IGHV1-8P0DP01 117 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 HCCSP53701 268 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 CBX1P83916 185 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 SLC34A1Q06495 639 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 CCDC121Q6ZUS5 278 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 DEFB107AQ8IZN7 70 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 OR10G2Q8NGC3 310 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 NRIP2Q9BQI9 281 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 PBOV1Q9GZY1 135 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 MAGIXQ9H6Y5 334 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 HES4Q9HCC6 221 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 ACTR3BQ9P1U1 418 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 TSSC4Q9Y5U2 329 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-205ENST00000559245 TCRBV4S1A1TA0A5B7 111 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 EDDM3BP56851 147 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 COL10A1Q03692 680 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 GABPB1Q06547 395 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 CD69Q07108 199 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 SPATS1Q496A3 300 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 TCTEX1D4Q5JR98 221 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 MINOS1Q5TGZ0 78 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 DEGS2Q6QHC5 323 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 CENPVQ7Z7K6 275 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 CPOQ8IVL8 374 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 ASCC1Q8N9N2 400 aaKnown RBP13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 BCAS4Q8TDM0 211 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 WWC2-AS2Q96NR7 200 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 TEAD3Q99594 435 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 MINOS1-NBL1R4GNA1 71 aa13.02□□□□□ -0.33
CDC42BPB-205ENST00000559245 TCRBV5S2A0A599 114 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 PQLC2LA1A4F0 135 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 FAM90A22PA8MWA6 464 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 H3BUI4 141 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 DHRS3O75911 302 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 DUS4LO95620 317 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 AZGP1P25311 298 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 ACTA2P62736 377 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 ACTG2P63267 376 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 ACTC1P68032 377 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 ACTA1P68133 377 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 GINS1Q14691 196 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 SLC35D3Q5M8T2 416 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 CLVS2Q5SYC1 327 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 KCTD18Q6PI47 426 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 C16orf89Q6UX73 402 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 ASRGL1Q7L266 308 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 BBS1Q8NFJ9 593 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 NDNFQ8TB73 568 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 GIPC3Q8TF64 312 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 MYDGFQ969H8 173 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 FEVQ99581 238 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 MROQ9BYG7 248 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 INPP5EQ9NRR6 644 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 GPR173Q9NS66 373 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 SLC22A13Q9Y226 551 aa13.01□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZNF737O75373 536 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 MPZP25189 248 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 HOXD3P31249 432 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-205ENST00000559245 ERVK11-1P61568 191 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 EGFEM1PQ0D2K5 195 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 LCN1P1Q5VSP4 162 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 TMEM42Q69YG0 159 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 GDPD3Q7L5L3 318 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZNF714Q96N38 554 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 YIPF3Q9GZM5 350 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 NUFIP1Q9UHK0 495 aaKnown RBP13□□□□□ -0.33
CDC42BPB-205ENST00000559245 TAGLN3Q9UI15 199 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 ARL2BPQ9Y2Y0 163 aa13□□□□□ -0.33
CDC42BPB-205ENST00000559245 PRR32B1ATL7 298 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 E9PQ18 207 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 DLGAP1O14490 977 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZNF254O75437 659 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 CLIC3O95833 236 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 TTRP02766 147 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 HMGN1P05114 100 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 CHRM2P08172 466 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 SLC2A5P22732 501 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 MFGE8Q08431 387 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZNF829Q3KNS6 432 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 ANGPTL5Q86XS5 388 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZNF679Q8IYX0 411 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZNF676Q8N7Q3 588 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 B9D2Q9BPU9 175 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 TTTY10Q9BZA0 68 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 FAM107BQ9H098 131 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 ARL8BQ9NVJ2 186 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 NDE1Q9NXR1 346 aa12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-205ENST00000559245 IGHV2-26A0A0B4J1V2 119 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 MRPL3P09001 348 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 RIDAP52758 137 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 ESRRGP62508 458 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 ROM1Q03395 351 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 MEF2CQ06413 473 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms