RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 LRRC20Q8TCA0 184 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 ZFAND1Q8TCF1 268 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 FAM131CQ96AQ9 280 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 S100PBPQ96BU1 408 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 ALS2CR12Q96Q35 445 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 TSNAXQ99598 290 aaKnown RBP1.38□□□□□ -2.19
VPS13C-207ENST00000558919 KLF6Q99612 283 aaPredicted RBP1.38□□□□□ -2.19
VPS13C-207ENST00000558919 NAPGQ99747 312 aaPredicted RBP1.38□□□□□ -2.19
VPS13C-207ENST00000558919 DAZ1Q9NQZ3 744 aaKnown RBP1.38□□□□□ -2.19
VPS13C-207ENST00000558919 TAS2R5Q9NYW4 299 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 ZNF492Q9P255 531 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 HMGXB4Q9UGU5 601 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 FARSAQ9Y285 508 aaKnown RBP1.38□□□□□ -2.19
VPS13C-207ENST00000558919 R4GN34 69 aa1.38□□□□□ -2.19
VPS13C-207ENST00000558919 RPRD2Q5VT52 1461 aaKnown RBP1.37□□□□□ -2.19
VPS13C-207ENST00000558919 GSTTP1A0A1W2PQM5 241 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 ISPDA4D126 451 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 H7C2Y5 167 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 J3QKU1 62 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 POLR3GO15318 223 aaPredicted RBP1.37□□□□□ -2.19
VPS13C-207ENST00000558919 GATCO43716 136 aaKnown RBP1.37□□□□□ -2.19
VPS13C-207ENST00000558919 GMDSO60547 372 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 TRAPPC6AO75865 159 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 SMC2O95347 1197 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 NPPAP01160 153 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 MAS1P04201 325 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 MMP7P09237 267 aaPredicted RBP1.37□□□□□ -2.19
VPS13C-207ENST00000558919 CCNOP22674 350 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 IL3RAP26951 378 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 GNRHRP30968 328 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 MLF1P58340 268 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 PPP1CAP62136 330 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 XIAPP98170 497 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 TRDNQ13061 729 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 C6orf183Q5T699 404 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 THOC7Q6I9Y2 204 aaKnown RBP1.37□□□□□ -2.19
VPS13C-207ENST00000558919 ORMDL3Q8N138 153 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 TMEM159Q96B96 161 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 Q96MT0 163 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 GABRG3Q99928 467 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 PDCD1LG2Q9BQ51 273 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 TRIM45Q9H8W5 580 aaPredicted RBP1.37□□□□□ -2.19
VPS13C-207ENST00000558919 C6orf50Q9HD87 102 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 CHMP5Q9NZZ3 219 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 CFL2Q9Y281 166 aa1.37□□□□□ -2.19
VPS13C-207ENST00000558919 NPHP4O75161 1426 aaPredicted RBP1.37□□□□□ -2.19
VPS13C-207ENST00000558919 PIK3R4Q99570 1358 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 TRAV8-6A0A0B4J262 113 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 ANKRD20A5PA0PJZ0 165 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 TMEM72A0PK05 275 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 HSBP1L1C9JCN9 74 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 E7EWF7 191 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 J3QT63 122 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 K7ERQ8 282 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 RNF113AO15541 343 aaKnown RBP1.36□□□□□ -2.19
VPS13C-207ENST00000558919 ALOX12BO75342 701 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 PTTG1O95997 202 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 OR5AL1P0C617 328 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 MPIP34949 423 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 DEKP35659 375 aaKnown RBP1.36□□□□□ -2.19
VPS13C-207ENST00000558919 CD151P48509 253 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 PSMD8P48556 350 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 TNNC1P63316 161 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 MAPRE2Q15555 327 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 KRTAP13-4Q3LI77 160 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 OTOGLQ3ZCN5 2332 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 FBXL19-AS1Q494R0 122 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 CDNFQ49AH0 187 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 HHATQ5VTY9 493 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 DUPD1Q68J44 220 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 MORN3Q6PF18 240 aaPredicted RBP1.36□□□□□ -2.19
VPS13C-207ENST00000558919 WDR59Q6PJI9 974 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 ST13P4Q8IZP2 240 aaPredicted RBP1.36□□□□□ -2.19
VPS13C-207ENST00000558919 SYCE1Q8N0S2 351 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 ZCCHC24Q8N2G6 241 aaKnown RBP1.36□□□□□ -2.19
VPS13C-207ENST00000558919 CYB561A3Q8NBI2 242 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 OR51A7Q8NH64 312 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 NDNFQ8TB73 568 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 ING5Q8WYH8 240 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 TMIGD2Q96BF3 282 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 CENPNQ96H22 339 aaPredicted RBP1.36□□□□□ -2.19
VPS13C-207ENST00000558919 RNF170Q96K19 258 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 ATP6V1G3Q96LB4 118 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 GLT1D1Q96MS3 346 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 CHID1Q9BWS9 393 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 TBL1XR1Q9BZK7 514 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 VCX3AQ9NNX9 186 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 TMEM100Q9NV29 134 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 TFR2Q9UP52 801 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 SLC7A11Q9UPY5 501 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 PPIL1Q9Y3C6 166 aa1.36□□□□□ -2.19
VPS13C-207ENST00000558919 SETD1AO15047 1707 aaKnown RBP1.35□□□□□ -2.19
VPS13C-207ENST00000558919 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
VPS13C-207ENST00000558919 ERICH2A1L162 156 aa1.35□□□□□ -2.19
VPS13C-207ENST00000558919 RAB19A4D1S5 217 aa1.35□□□□□ -2.19
VPS13C-207ENST00000558919 SEC14L6B5MCN3 397 aa1.35□□□□□ -2.19
VPS13C-207ENST00000558919 CLDN34H7C241 214 aa1.35□□□□□ -2.19
VPS13C-207ENST00000558919 RFXANKO14593 260 aa1.35□□□□□ -2.19
VPS13C-207ENST00000558919 PRMT5O14744 637 aaPredicted RBP1.35□□□□□ -2.19
VPS13C-207ENST00000558919 RHOCP08134 193 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms