RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 FAM90A23PA8MXZ1 464 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM25AB3EWG3 89 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM25CB3EWG5 89 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM25GB3EWG6 89 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 CDIPTO14735 213 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 TPD52L2O43399 206 aaKnown RBP12.59□□□□□ -0.39
VPS18-202ENST00000558474 ANGPTL7O43827 346 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 CRTAPO75718 401 aaPredicted RBP12.59□□□□□ -0.39
VPS18-202ENST00000558474 IGKV1D-12P01611 117 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 CD8AP01732 235 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM90A15PP0C7V4 464 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM90A13PP0C7W8 464 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM90A14PP0C7W9 464 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM90A24PP0C7X0 464 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 ELK1P19419 428 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 CPT2P23786 658 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 NR4A2P43354 598 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 ERVK11-1P61568 191 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 RPS27AP62979 156 aaKnown RBP12.59□□□□□ -0.39
VPS18-202ENST00000558474 ZNF45Q02386 682 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 UNC119Q13432 240 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 SLC22A6Q4U2R8 563 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 WDR82Q6UXN9 313 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 OSR2Q8N2R0 312 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 FAM89BQ8N5H3 189 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 OR51T1Q8NGJ9 327 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 ITLN1Q8WWA0 313 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 HPS1Q92902 700 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 PHF21AQ96BD5 680 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 SLC25A38Q96DW6 304 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 DIRAS2Q96HU8 199 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
VPS18-202ENST00000558474 NRIP2Q9BQI9 281 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 RAB1BQ9H0U4 201 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 CLEC4MQ9H2X3 399 aaPredicted RBP12.59□□□□□ -0.39
VPS18-202ENST00000558474 SAP30LQ9HAJ7 183 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 ELL3Q9HB65 397 aaPredicted RBP12.59□□□□□ -0.39
VPS18-202ENST00000558474 HMG20AQ9NP66 347 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
VPS18-202ENST00000558474 A1L4Q6 167 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 A6NLC8 198 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 H7C417 338 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 SYNGR1O43759 233 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 HTR3BO95264 441 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 PLATP00750 562 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 EIF4EP06730 217 aaKnown RBP12.58□□□□□ -0.4
VPS18-202ENST00000558474 MGMTP16455 207 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 SERPINA2P20848 420 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 MNDAP41218 407 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 FGF12P61328 243 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
VPS18-202ENST00000558474 ARL6IP1Q15041 203 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 PRAMEF6Q5VXH4 476 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 FIP1L1Q6UN15 594 aaKnown RBP12.58□□□□□ -0.4
VPS18-202ENST00000558474 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 CMTM4Q8IZR5 234 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 NEU4Q8WWR8 484 aaPredicted RBP12.58□□□□□ -0.4
VPS18-202ENST00000558474 FAM46BQ96A09 425 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 SLAMF9Q96A28 289 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 WDR12Q9GZL7 423 aaKnown RBP12.58□□□□□ -0.4
VPS18-202ENST00000558474 LPAR5Q9H1C0 372 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 PLEKHF2Q9H8W4 249 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 UBTD1Q9HAC8 227 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 SEBOXQ9HB31 216 aaPredicted RBP12.58□□□□□ -0.4
VPS18-202ENST00000558474 HES4Q9HCC6 221 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 GCM1Q9NP62 436 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 TANC2Q9HCD6 1990 aa12.58□□□□□ -0.4
VPS18-202ENST00000558474 LRRC30A6NM36 301 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 CLDN25C9JDP6 229 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 XRCC3O43542 346 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 RHBDL1O75783 438 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 MPIG6BO95866 241 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 SFTPBP07988 381 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 SOD3P08294 240 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 BCL3P20749 454 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 CCL8P80075 99 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 IL13RA2Q14627 380 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 MPPED2Q15777 294 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 SPIN3Q5JUX0 258 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 FAM58AQ8N1B3 248 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 TMEM104Q8NE00 496 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 OR56B1Q8NGI3 324 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 Q96M66 194 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 SOSTQ9BQB4 213 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 ATG5Q9H1Y0 275 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 AKIP1Q9NQ31 210 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 RNF7Q9UBF6 113 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 PPP1R3CQ9UQK1 317 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 PLEKHA6Q9Y2H5 1048 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 NPTNQ9Y639 398 aa12.57□□□□□ -0.4
VPS18-202ENST00000558474 ARFGEF3Q5TH69 2177 aa12.56□□□□□ -0.4
VPS18-202ENST00000558474 FABP12A6NFH5 140 aa12.56□□□□□ -0.4
VPS18-202ENST00000558474 SRRM5B3KS81 715 aa12.56□□□□□ -0.4
VPS18-202ENST00000558474 FSTL3O95633 263 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms