RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 METTL11BQ5VVY1 283 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 FIP1L1Q6UN15 594 aaKnown RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 ACP7Q6ZNF0 438 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 CMTM4Q8IZR5 234 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 ZNF561Q8N587 486 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 OR13C3Q8NGS6 347 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 ST8SIA4Q92187 359 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 GGHQ92820 318 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 CPNE2Q96FN4 548 aaPredicted RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 SDSLQ96GA7 329 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 NRIP2Q9BQI9 281 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 MS4A7Q9GZW8 240 aaPredicted RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 RASSF4Q9H2L5 321 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 ISG20L2Q9H9L3 353 aaKnown RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 SEBOXQ9HB31 216 aaPredicted RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 RHOFQ9HBH0 211 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 SNTG1Q9NSN8 517 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 SLC25A10Q9UBX3 287 aaPredicted RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 GLS2Q9UI32 602 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 RPUSD1Q9UJJ7 312 aaKnown RBP7.03□□□□□ -1.28
TPM1-213ENST00000558400 KPTNQ9Y664 436 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 ARHGAP32A7KAX9 2087 aa7.03□□□□□ -1.28
TPM1-213ENST00000558400 TRBV23-1A0A0A0MS06 115 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 A0A1W2PPH5 198 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 RFPL4AA6NLU0 287 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 C22orf46C9J442 243 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 RFPL4AL1F8VTS6 287 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 TRIM77I1YAP6 450 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 MAGEB3O15480 346 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 OGG1O15527 345 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 SYNGR1O43759 233 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 TOX4O94842 621 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 KNG1P01042 644 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 CHRM2P08172 466 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 NDUFB7P17568 137 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 AMY2BP19961 511 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 HSPA13P48723 471 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 ETV1P50549 477 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 TAS2R43P59537 309 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 HILS1P60008 231 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 FGF12P61328 243 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 ERVK11-1P61568 191 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 HOXA4Q00056 320 aaPredicted RBP7.02□□□□□ -1.29
TPM1-213ENST00000558400 IKZF1Q13422 519 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 RIPK1Q13546 671 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 BLMHQ13867 455 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 GPR157Q5UAW9 335 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 C9orf139Q6ZV77 190 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 ANGPTL5Q86XS5 388 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 CALHM1Q8IU99 346 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 STX19Q8N4C7 294 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 PARP16Q8N5Y8 322 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 LY6G5BQ8NDX9 201 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 OR5D13Q8NGL4 314 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 OR52N1Q8NH53 320 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 C8orf46Q8TAG6 207 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 TRMT10AQ8TBZ6 339 aaKnown RBP7.02□□□□□ -1.29
TPM1-213ENST00000558400 GPR148Q8TDV2 347 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 NPRL2Q8WTW4 380 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 FBLIM1Q8WUP2 373 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 SEH1LQ96EE3 360 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 ADAT3Q96EY9 351 aaPredicted RBP7.02□□□□□ -1.29
TPM1-213ENST00000558400 CEP19Q96LK0 163 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 WDFY2Q96P53 400 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 OPALINQ96PE5 141 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 DCTN5Q9BTE1 182 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 FAM234AQ9H0X4 552 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 ZCCHC4Q9H5U6 513 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 HES4Q9HCC6 221 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 SCN3BQ9NY72 215 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 NKX1-2Q9UD57 310 aaPredicted RBP7.02□□□□□ -1.29
TPM1-213ENST00000558400 PSORS1C1Q9UIG5 152 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 DHDHQ9UQ10 334 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 ERGIC3Q9Y282 383 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 PCDHGB5Q9Y5G0 923 aa7.02□□□□□ -1.29
TPM1-213ENST00000558400 IGKV1D-17A0A075B6S4 117 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 hCG_1809904A0A1W2PP81 198 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 A0A1W2PPE2 198 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 A0A1W2PR64 198 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 A0A1W2PRV1 198 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 E9PI62 339 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 H3BSH0 61 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 ST8SIA5O15466 376 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 PLATP00750 562 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 GNAO1P09471 354 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 AZGP1P25311 298 aaKnown RBP7.01□□□□□ -1.29
TPM1-213ENST00000558400 CAPZA1P52907 286 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 ARF6P62330 175 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 PDZK1IP1Q13113 114 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 KLF17Q5JT82 389 aaPredicted RBP7.01□□□□□ -1.29
TPM1-213ENST00000558400 C6orf141Q5SZD1 244 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 RNLSQ5VYX0 342 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 METAP1DQ6UB28 335 aaPredicted RBP7.01□□□□□ -1.29
TPM1-213ENST00000558400 SLC25A26Q70HW3 274 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 SAXO1Q8IYX7 474 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 KIR3DL3Q8N743 410 aa7.01□□□□□ -1.29
TPM1-213ENST00000558400 FAM216BQ8N7L0 139 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms