RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 FOXI3A8MTJ6 420 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 C19orf84I3L1E1 186 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 SOCS1O15524 211 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 AKR7A2O43488 359 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 SPRY3O43610 288 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 RHBDL1O75783 438 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 PTBP3O95758 552 aaKnown RBP12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 PTHLHP12272 177 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 IGFBP2P18065 325 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 SERPINF1P36955 418 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 ZNF81P51508 661 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 FGF12P61328 243 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 FBXL14Q8N1E6 418 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 BATF2Q8N1L9 274 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 GCDHQ92947 438 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 YIPF5Q969M3 257 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 MEGF10Q96KG7 1140 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 THAP7Q9BT49 309 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 AUNIPQ9H7T9 357 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 RHOFQ9HBH0 211 aa12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 RBFOX1Q9NWB1 397 aaKnown RBP12.28□□□□□ -0.44
ARHGEF40-208ENST00000557498 HIVEP3Q5T1R4 2406 aa12.27□□□□□ -0.44
ARHGEF40-208ENST00000557498 IGHV3-64DA0A0J9YX35 117 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 A6NLC8 198 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 CDIPTO14735 213 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 IGHV1-46P01743 117 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 CD3GP09693 182 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 PGA5P0DJD9 388 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 HIST1H1DP16402 221 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 GABRR1P24046 479 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 APOBEC3AP31941 199 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 PRSS3P35030 304 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 DEFA1P59665 94 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 DEFA3P59666 94 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 SCN1BQ07699 218 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 EFNB3Q15768 340 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 PIGYQ3MUY2 71 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 ZNF672Q499Z4 452 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 NHLRC3Q5JS37 347 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 PLAC9Q5JTB6 97 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 HACD4Q5VWC8 232 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 DNM1P46Q6ZS02 220 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 C11orf53Q8IXP5 236 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 Q8IYB0 196 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 CELF2-AS1Q8N7Q2 184 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 C19orf18Q8NEA5 215 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 OR52I2Q8NH67 350 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 LILRB1Q8NHL6 650 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 FCAMRQ8WWV6 532 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 RAB3CQ96E17 227 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 POM121Q96HA1 1249 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 ZNF488Q96MN9 340 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 DHRS9Q9BPW9 319 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 CISD1Q9NZ45 108 aaKnown RBP12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 ZDHHC8Q9ULC8 765 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
ARHGEF40-208ENST00000557498 CADP27708 2225 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 MEIOCA2RUB1 952 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 TMEM235A6NFC5 223 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 VGLL3A8MV65 326 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 F8VVB4 439 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 F8VWA3 439 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 M0R233 179 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 SULT1C2O00338 296 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 MFNGO00587 321 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 LANCL1O43813 399 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 ADH4P08319 380 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 ACAA1P09110 424 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 GSTP1P09211 210 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 RNF224P0DH78 156 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 GNB3P16520 340 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 TNFSF4P23510 183 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 BLVRBP30043 206 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 INPP1P49441 399 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 SRP9P49458 86 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 ERVK11-1P61568 191 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 TNFAIP6P98066 277 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 TAF9Q16594 264 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 RGS21Q2M5E4 152 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 Q6ZTK2 550 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 RTN4RL2Q86UN3 420 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 POC1AQ8NBT0 407 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 SETD6Q8TBK2 473 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 EMG1Q92979 244 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 ARHGAP5-AS1Q96IT6 56 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 OR2V2Q96R30 315 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 DIRC2Q96SL1 478 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 NRIP2Q9BQI9 281 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 ZMAT3Q9HA38 289 aaKnown RBP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 SCPEP1Q9HB40 452 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 TBC1D24Q9ULP9 559 aa12.26□□□□□ -0.45
ARHGEF40-208ENST00000557498 PRRC2CQ9Y520 2896 aaKnown RBP12.25□□□□□ -0.45
ARHGEF40-208ENST00000557498 FAM90A10PA6NDY2 464 aa12.25□□□□□ -0.45
ARHGEF40-208ENST00000557498 FAM90A18PA6NE21 464 aa12.25□□□□□ -0.45
ARHGEF40-208ENST00000557498 FAM90A16PA6NEW6 464 aa12.25□□□□□ -0.45
ARHGEF40-208ENST00000557498 FAM90A20PA6NIJ5 464 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms