RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 TNFRSF13BO14836 293 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-227ENST00000557269 SFTPBP07988 381 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 ACAA1P09110 424 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-227ENST00000557269 AMY2BP19961 511 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 GLRA1P23415 457 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 PTGFRP43088 359 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 NCS1P62166 190 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 TEX36Q5VZQ5 186 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 LYPD2Q6UXB3 125 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 ASCL4Q6XD76 172 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 GPR141Q7Z602 305 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 LRRC28Q86X40 367 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-227ENST00000557269 FAM90A1Q86YD7 464 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 MKXQ8IYA7 352 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 C1orf87Q8N0U7 546 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 NKAIN3Q8N8D7 197 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 OR10K1Q8NGX5 313 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 RAB1CQ92928 201 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 TIMD4Q96H15 378 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 CEP19Q96LK0 163 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 FAM192AQ9GZU8 254 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 SLITRK2Q9H156 845 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 HES4Q9HCC6 221 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 RBFOX1Q9NWB1 397 aaKnown RBP10.73□□□□□ -0.69
SHMT2-227ENST00000557269 IL36RNQ9UBH0 155 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 POLDIP2Q9Y2S7 368 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 AKAP9Q99996 3911 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 A0A0G2JK05 382 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 ISPDA4D126 451 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 OOEPA6NGQ2 149 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 KDM4BO94953 1096 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 GYPAP02724 150 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 MYL9P24844 172 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 IL2RGP31785 369 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 SDC2P34741 201 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 CAV3P56539 151 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 CTF1Q16619 201 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 ZNF404Q494X3 552 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 C1orf100Q5SVJ3 147 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 FAM166AQ6J272 317 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 ACP7Q6ZNF0 438 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 PEG10Q86TG7 708 aaKnown RBP10.72□□□□□ -0.69
SHMT2-227ENST00000557269 ANKRD13BQ86YJ7 626 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 CDH26Q8IXH8 852 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 SAXO1Q8IYX7 474 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 ZSCAN4Q8NAM6 433 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-227ENST00000557269 CLDND2Q8NHS1 167 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 SLC25A28Q96A46 364 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 C1orf147Q96MC9 270 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-227ENST00000557269 KCTD7Q96MP8 289 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 TMEM246Q9BRR3 403 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 REG4Q9BYZ8 158 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 KCNK15Q9H427 330 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 SMURF1Q9HCE7 757 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 ING4Q9UNL4 249 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 GSTK1Q9Y2Q3 226 aa10.72□□□□□ -0.69
SHMT2-227ENST00000557269 MRPS28Q9Y2Q9 187 aaKnown RBP10.72□□□□□ -0.69
SHMT2-227ENST00000557269 IGKV1D-17A0A075B6S4 117 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 A0A1B0GW55 424 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 A0A1W2PP11 408 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 TRAPPC2LH3BP13 241 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 FCN3O75636 299 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 NXPH2O95156 264 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 GABARAPO95166 117 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 FSTL3O95633 263 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4L2P0CJ85 424 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4L3P0CJ86 424 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4L4P0CJ87 422 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4L5P0CJ88 424 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4L6P0CJ89 424 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4L7P0CJ90 424 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 SLC25A16P16260 332 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 MDH2P40926 338 aaKnown RBP10.71□□□□□ -0.69
SHMT2-227ENST00000557269 MTNR1BP49286 362 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 CEBPDP49716 269 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-227ENST00000557269 VBP1P61758 197 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 LMO4P61968 165 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 MXD1Q05195 221 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 P2RY14Q15391 338 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 TIMM50Q3ZCQ8 353 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 GLT8D1Q68CQ7 371 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4L9Q6RFH8 374 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-227ENST00000557269 METAP1DQ6UB28 335 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-227ENST00000557269 GLIPR1L1Q6UWM5 242 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 GDPGP1Q6ZNW5 385 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 OTOGQ6ZRI0 2925 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 VPS13CQ709C8 3753 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 PXT1Q8NFP0 134 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 UQCC2Q9BRT2 126 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 ELL3Q9HB65 397 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-227ENST00000557269 RASL12Q9NYN1 266 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 NLKQ9UBE8 527 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 DUX4Q9UBX2 424 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 V9GY05 133 aa10.71□□□□□ -0.69
SHMT2-227ENST00000557269 TEX15Q9BXT5 2789 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 A0A0B4J203 849 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 OR2AT4A6NND4 320 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 CEACAM18A8MTB9 384 aa10.7□□□□□ -0.7
SHMT2-227ENST00000557269 H7C1Q1 480 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms