RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 COX7A1P24310 79 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 CNTFRP26992 372 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 BRS3P32247 399 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 MDH1P40925 334 aaKnown RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 GABRA2P47869 451 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 DLX6P56179 175 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 ABCE1P61221 599 aaKnown RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 CSNK2BP67870 215 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 SLC35B1P78383 322 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 SLC34A1Q06495 639 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 TRAP1Q12931 704 aaKnown RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 IL18R1Q13478 541 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 RNASE12Q5GAN4 147 aaKnown RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 C6orf10Q5SRN2 563 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 TEX38Q6PEX7 206 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 BCDIN3DQ7Z5W3 292 aaKnown RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 WDR86Q86TI4 376 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 FAM185AQ8N0U4 392 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 C4orf33Q8N1A6 199 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 DRAM1Q8N682 238 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF781Q8N8C0 355 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 GPR32P1Q8NGA4 272 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 OR4D11Q8NGI4 311 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 OR2T27Q8NH04 317 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 OR4Q3Q8NH05 313 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 TMEM255BQ8WV15 326 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 BPIFA2Q96DR5 249 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 PITX2Q99697 317 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 ATF6BQ99941 703 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 TXLNGYQ9BZA5 131 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 POLR2J2Q9GZM3 115 aaKnown RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 C20orf27Q9GZN8 174 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 POLR2J3Q9H1A7 115 aaKnown RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 OPA3Q9H6K4 179 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 SP140LQ9H930 580 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 HEYLQ9NQ87 328 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 SDR39U1Q9NRG7 319 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-223ENST00000557076 SLC25A37Q9NYZ2 338 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 NLKQ9UBE8 527 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 RIMS3Q9UJD0 308 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 HAO1Q9UJM8 370 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 RPS6KA6Q9UK32 745 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 HHLA2Q9UM44 414 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 MED31Q9Y3C7 131 aa3.65□□□□□ -1.83
SCFD1-223ENST00000557076 TRIM64CA6NLI5 447 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 H7C1C5 153 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 RGS10O43665 173 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 RRP9O43818 475 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 OR5F1O95221 314 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF728P0DKX0 622 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 PSG2P11465 335 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 GP9P14770 177 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 SPNP16150 400 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 CCL3L1P16619 93 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 AQP1P29972 269 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 OTX1P32242 354 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 POLR2JP52435 117 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 NANOS2P60321 138 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 SUMO2P61956 95 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 LCN6P62502 163 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 DYNC1I2Q13409 638 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 FHL3Q13643 280 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 HAGHQ16775 308 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 PNLIPRP3Q17RR3 467 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 SNAI3Q3KNW1 292 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 LRIF1Q5T3J3 769 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 OTPQ5XKR4 325 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 GPR139Q6DWJ6 353 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 LIN54Q6MZP7 749 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 CORO6Q6QEF8 472 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 DRAM2Q6UX65 266 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 C16orf89Q6UX73 402 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 FAM122BQ7Z309 247 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 OAFQ86UD1 273 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 LYPD6Q86Y78 171 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 CCDC28AQ8IWP9 274 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 IZUMO1Q8IYV9 350 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 RPP25LQ8N5L8 163 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 OR56B2PQ8NGI1 322 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 OR51A7Q8NH64 312 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 TRIM63Q969Q1 353 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 SPTSSAQ969W0 71 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 APOPT1Q96IL0 206 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 SLC25A33Q9BSK2 321 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 NUAK2Q9H093 628 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 ELL3Q9HB65 397 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 PNRC2Q9NPJ4 139 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 CHCHD3Q9NX63 227 aaKnown RBP3.64□□□□□ -1.83
SCFD1-223ENST00000557076 RASL12Q9NYN1 266 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 CYB5R1Q9UHQ9 305 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF222Q9UK12 451 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 POLR1DQ9Y2S0 133 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
SCFD1-223ENST00000557076 FAM90A18PA6NE21 464 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM90A16PA6NEW6 464 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM90A20PA6NIJ5 464 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 RFPL4AA6NLU0 287 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 TMEM210A6NLX4 147 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM90A9PA6NNJ1 464 aa3.63□□□□□ -1.83
SCFD1-223ENST00000557076 FAM90A12PA8MX19 464 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms