RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ZNF420Q8TAQ5 688 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-244ENST00000556898 DYNC2LI1Q8TCX1 351 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 ZNF488Q96MN9 340 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 PAPOLGQ9BWT3 736 aaKnown RBP4.49□□□□□ -1.69
ATXN3-244ENST00000556898 CHST5Q9GZS9 411 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 PLK3Q9H4B4 646 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 RGCCQ9H4X1 137 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 ZMAT4Q9H898 229 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 PLEKHF2Q9H8W4 249 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 TCF7L1Q9HCS4 588 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 NGBQ9NPG2 151 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 CISD1Q9NZ45 108 aaKnown RBP4.49□□□□□ -1.69
ATXN3-244ENST00000556898 TREM2Q9NZC2 230 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 NDUFA13Q9P0J0 144 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 FOXJ3Q9UPW0 622 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 GSTK1Q9Y2Q3 226 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 CMAHPQ9Y471 501 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 SPEF1Q9Y4P9 236 aa4.49□□□□□ -1.69
ATXN3-244ENST00000556898 JMJD1CQ15652 2540 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 TRAV1-2A0A0B4J238 106 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 IGKV1-12A0A0C4DH73 117 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 LOC390937A0A1W2PQ73 354 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 RNF212BA8MTL3 300 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 INAFM1C9JVW0 142 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 F8VVB4 439 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 F8VWA3 439 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 H7C1Q1 480 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 SLC22A1O15245 554 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 SULT1B1O43704 296 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 SYNGR1O43759 233 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ANGPTL7O43827 346 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 MTRF1O75570 445 aaKnown RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 RHBDL1O75783 438 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ARL6IP5O75915 188 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 GOSR1O95249 250 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 PAHP00439 452 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 IGKV1D-12P01611 117 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 IGHV1-46P01743 117 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 IGHV3-13P01766 116 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 TFF1P04155 84 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 GRPP07492 148 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 SOD3P08294 240 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ZNF12P17014 697 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 RAB3AP20336 220 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 RAB3BP20337 219 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 GALP22466 123 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 CFL1P23528 166 aaKnown RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 PAX7P23759 505 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 MAPK3P27361 379 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 PMELP40967 661 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 POU3F4P49335 361 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 KLF3P57682 345 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 PPP3R1P63098 170 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 IL13RA1P78552 427 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 MAB21L1Q13394 359 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 OR8G1Q15617 311 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 MPPED2Q15777 294 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 IDNKQ5T6J7 187 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 SFXN4Q6P4A7 337 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 PRSS57Q6UWY2 283 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ZNF826PQ6ZT77 177 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 RTN4RL2Q86UN3 420 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 CALHM1Q8IU99 346 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 C11orf53Q8IXP5 236 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ZDHHC23Q8IYP9 409 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 LRRC75A-AS1Q8N1F1 130 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 Q8N1X5 172 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 JAGN1Q8N5M9 183 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 STPG3Q8N7X2 389 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 CSNK2A3Q8NEV1 391 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 OR2Z1Q8NG97 314 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 OR10K1Q8NGX5 313 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 OR5P3Q8WZ94 311 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 SLC25A28Q96A46 364 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 RNF170Q96K19 258 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 GAL3ST1Q99999 423 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 DHRS9Q9BPW9 319 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ADAT1Q9BUB4 502 aaKnown RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 SLIRPQ9GZT3 109 aaKnown RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 FAM192AQ9GZU8 254 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 METTL17Q9H7H0 456 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ZNF442Q9H7R0 627 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 UBTD1Q9HAC8 227 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 MOV10Q9HCE1 1003 aaKnown RBP4.48□□□□□ -1.69
ATXN3-244ENST00000556898 UFSP2Q9NUQ7 469 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 TMEM100Q9NV29 134 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 DCAF16Q9NXF7 216 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 DAPK2Q9UIK4 370 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 ING4Q9UNL4 249 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 V9GY05 133 aa4.48□□□□□ -1.69
ATXN3-244ENST00000556898 FN1P02751 2386 aaKnown RBP4.47□□□□□ -1.69
ATXN3-244ENST00000556898 PQLC2LA1A4F0 135 aa4.47□□□□□ -1.69
ATXN3-244ENST00000556898 ANXA2P2A6NMY6 339 aa4.47□□□□□ -1.69
ATXN3-244ENST00000556898 IFITM5A6NNB3 132 aa4.47□□□□□ -1.69
ATXN3-244ENST00000556898 DHRS7CA6NNS2 312 aa4.47□□□□□ -1.69
ATXN3-244ENST00000556898 LYNX1G3V0Z9 82 aa4.47□□□□□ -1.69
ATXN3-244ENST00000556898 ZNF701M0R085 212 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-244ENST00000556898 CTDSP2O14595 271 aa4.47□□□□□ -1.69
ATXN3-244ENST00000556898 CDIPTO14735 213 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms