RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PIPOXQ9P0Z9 390 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 MARCOQ9UEW3 520 aaPredicted RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 SHPKQ9UHJ6 478 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 CFAP20Q9Y6A4 193 aaKnown RBP5.42□□□□□ -1.54
TDP1-215ENST00000556498 WSB1Q9Y6I7 421 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 STRCQ7RTU9 1775 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 NRKQ7Z2Y5 1582 aa5.42□□□□□ -1.54
TDP1-215ENST00000556498 A0A0U1RRA0 63 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 A0A1B0GU03 582 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PRE2 83 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PRF3 423 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PRM7 423 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 ZNF840PA6NDX5 716 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 HHLA1C9JL84 531 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 H7BYZ3 331 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 M0R2Z0 102 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 RAB27BO00194 218 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 CTDSPLO15194 276 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 HMGB3O15347 200 aaKnown RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 CREBL2O60519 120 aaPredicted RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 CER1O95813 267 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 CTSDP07339 412 aaPredicted RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 OR4A8P0C604 315 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 TRGC1P0CF51 173 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 SLC25A4P12235 298 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 TPT1P13693 172 aaKnown RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 CTSEP14091 401 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 COX7A2P14406 83 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 EVI2AP22794 236 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 GUCA1AP43080 201 aaPredicted RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 CRYBB2P43320 205 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 PRLHRP49683 370 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 CAMPP49913 170 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 HNRNPA3P51991 378 aaKnown RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 UFM1P61960 85 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 AKR1C1Q04828 323 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 MALLQ13021 153 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 P2RY6Q15077 328 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 SIX1Q15475 284 aaPredicted RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 ST3GAL2Q16842 350 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 CLEC12AQ5QGZ9 265 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 GLT8D1Q68CQ7 371 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 STUMQ69YW2 141 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 FCRL6Q6DN72 434 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.41□□□□□ -1.54
TDP1-215ENST00000556498 LRRC55Q6ZSA7 311 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 MEPCEQ7L2J0 689 aaKnown RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 ADGRE4PQ86SQ3 457 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 CLEC14AQ86T13 490 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 MUC15Q8N387 334 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 PROKR1Q8TCW9 393 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 APH1AQ96BI3 265 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 MBD6Q96DN6 1003 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 SLAMF6Q96DU3 332 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 DUX3Q96PT4 197 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 DERL1Q9BUN8 251 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 DUSP16Q9BY84 665 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 SAMD10Q9BYL1 202 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 VN1R1Q9GZP7 353 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 GTSF1LQ9H1H1 148 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 FAM124BQ9H5Z6 455 aaPredicted RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 ELOVL3Q9HB03 270 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 BPIFA1Q9NP55 256 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 ENY2Q9NPA8 101 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 GPR84Q9NQS5 396 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 INPP5EQ9NRR6 644 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 RBM22Q9NW64 420 aaKnown RBP eCLIP5.41□□□□□ -1.54
TDP1-215ENST00000556498 TMEM242Q9NWH2 141 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 TXNL4BQ9NX01 149 aaKnown RBP5.41□□□□□ -1.54
TDP1-215ENST00000556498 DNAJC27Q9NZQ0 273 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 B4GALT7Q9UBV7 327 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 RCE1Q9Y256 329 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 CYSLTR1Q9Y271 337 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 HS3ST2Q9Y278 367 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 HDGFL3Q9Y3E1 203 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 ENPP4Q9Y6X5 453 aa5.41□□□□□ -1.54
TDP1-215ENST00000556498 USP54Q70EL1 1684 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 CAMTA1Q9Y6Y1 1673 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 PXDNQ92626 1479 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 CROCCQ5TZA2 2017 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PPV9 198 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 A0A1W2PRX2 142 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 TMEM235A6NFC5 223 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 SERINC4A6NH21 518 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 FAM183AA6NL82 134 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 SHISA7A6NL88 538 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 G3V2L1 256 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 PLPP3O14495 311 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 MPZL1O95297 269 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 KLF8O95600 359 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 HLA-DQB2P05538 268 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 PGA3P0DJD8 388 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 UNGP13051 313 aaPredicted RBP5.4□□□□□ -1.54
TDP1-215ENST00000556498 CD34P28906 385 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 NTSP30990 170 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 KLK7P49862 253 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 MEOX1P50221 254 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 SLURP1P55000 103 aa5.4□□□□□ -1.54
TDP1-215ENST00000556498 TCL1AP56279 114 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms