RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 DANCRP0C864 163 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 VSIG8P0DPA2 414 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 GLRA1P23415 457 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 CPT2P23786 658 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 PTBP1P26599 531 aaKnown RBP eCLIP7.81□□□□□ -1.16
ACTN1-218ENST00000556343 TNFSF8P32971 234 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 NR4A2P43354 598 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 PITPNBP48739 271 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 CCL8P80075 99 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 KCNJ8Q15842 424 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 ZNF181Q2M3W8 571 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 TMEM255AQ5JRV8 349 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 PRAMEF6Q5VXH4 476 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 ELP2Q6IA86 826 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 PEG10Q86TG7 708 aaKnown RBP7.81□□□□□ -1.16
ACTN1-218ENST00000556343 MOGAT3Q86VF5 341 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A1Q86YD7 464 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 CALHM1Q8IU99 346 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 FAM58AQ8N1B3 248 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 POC1AQ8NBT0 407 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 OR56B1Q8NGI3 324 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 OR5H6Q8NGV6 325 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 Q8TCH9 128 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 EMG1Q92979 244 aaKnown RBP7.81□□□□□ -1.16
ACTN1-218ENST00000556343 SLAMF9Q96A28 289 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 TRAF4Q9BUZ4 470 aaPredicted RBP7.81□□□□□ -1.16
ACTN1-218ENST00000556343 SELENOIQ9C0D9 397 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 WDR12Q9GZL7 423 aaKnown RBP7.81□□□□□ -1.16
ACTN1-218ENST00000556343 FGF23Q9GZV9 251 aaPredicted RBP7.81□□□□□ -1.16
ACTN1-218ENST00000556343 SPACA1Q9HBV2 294 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 DLL4Q9NR61 685 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 UFSP2Q9NUQ7 469 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 RHBDL2Q9NX52 303 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 RNF7Q9UBF6 113 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 EXTL2Q9UBQ6 330 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 DNAJB11Q9UBS4 358 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 NPTNQ9Y639 398 aa7.81□□□□□ -1.16
ACTN1-218ENST00000556343 FLNCQ14315 2725 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 USP9XQ93008 2570 aaPredicted RBP7.8□□□□□ -1.16
ACTN1-218ENST00000556343 A0A0B4J203 849 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A10PA6NDY2 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A18PA6NE21 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A16PA6NEW6 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A20PA6NIJ5 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A8PA6NJQ4 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A7PA6NKC0 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A22PA8MWA6 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A12PA8MX19 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A5PA8MXJ8 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A23PA8MXZ1 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 CLDN25C9JDP6 229 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 SH2D1BO14796 132 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 LDLRAD4O15165 306 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 SYNGR1O43759 233 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 SOD3P08294 240 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A15PP0C7V4 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A13PP0C7W8 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A14PP0C7W9 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM90A24PP0C7X0 464 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 PGA5P0DJD9 388 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 MGMTP16455 207 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 BCL3P20749 454 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 MNDAP41218 407 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FGF12P61328 243 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 RPS27AP62979 156 aaKnown RBP7.8□□□□□ -1.16
ACTN1-218ENST00000556343 MRPS11P82912 194 aaKnown RBP7.8□□□□□ -1.16
ACTN1-218ENST00000556343 MRPS15P82914 257 aaKnown RBP7.8□□□□□ -1.16
ACTN1-218ENST00000556343 LSAMPQ13449 338 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 IL13RA2Q14627 380 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 ZNF846Q147U1 533 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 HFEQ30201 348 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 SMIM21Q3B7S5 101 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 TMEM69Q5SWH9 247 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 FAM131AQ6UXB0 335 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 C1QL2Q7Z5L3 287 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 CHST4Q8NCG5 386 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 Q8NFD4 153 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 OR10K1Q8NGX5 313 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 LRRC29Q8WV35 223 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 GTF3AQ92664 365 aaKnown RBP7.8□□□□□ -1.16
ACTN1-218ENST00000556343 NEDD4LQ96PU5 975 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 PSMG3-AS1Q96PY0 264 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 NUDT16L1Q9BRJ7 211 aaKnown RBP7.8□□□□□ -1.16
ACTN1-218ENST00000556343 TM2D1Q9BX74 207 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 CACNG6Q9BXT2 260 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 BANF2Q9H503 90 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 GCM1Q9NP62 436 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 MTCH1Q9NZJ7 389 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 ST3GAL6Q9Y274 331 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 PLCE1Q9P212 2302 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 ABCA4P78363 2273 aa7.8□□□□□ -1.16
ACTN1-218ENST00000556343 ROS1P08922 2347 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 LRRK2Q5S007 2527 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 IGKV1-12A0A0C4DH73 117 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 IGHV1-69-2A0A0G2JMI3 117 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 IGHV3-64DA0A0J9YX35 117 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 H7C417 338 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 DEGS1O15121 323 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 XRCC3O43542 346 aa7.79□□□□□ -1.16
ACTN1-218ENST00000556343 IGKV1D-12P01611 117 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms