RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 AHSA1O95433 338 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 LDOC1O95751 146 aaPredicted RBP3.16□□□□□ -1.9
VRK1-205ENST00000555402 MMP7P09237 267 aaPredicted RBP3.16□□□□□ -1.9
VRK1-205ENST00000555402 GALR1P47211 349 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 MLF1P58340 268 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 ZNF816Q0VGE8 651 aaPredicted RBP3.16□□□□□ -1.9
VRK1-205ENST00000555402 TAL2Q16559 108 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 HHATQ5VTY9 493 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 LRRC6Q86X45 466 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 BOD1L2Q8IYS8 172 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 H1FOOQ8IZA3 346 aaPredicted RBP3.16□□□□□ -1.9
VRK1-205ENST00000555402 CDRT4Q8N9R6 151 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 CCDC127Q96BQ5 260 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 CHMP6Q96FZ7 201 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 SNF8Q96H20 258 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 ZNF251Q9BRH9 671 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 CHCHD7Q9BUK0 85 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 BEX2Q9BXY8 128 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 SHCBP1LQ9BZQ2 653 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 LRRC19Q9H756 370 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 VAX2Q9UIW0 290 aa3.16□□□□□ -1.9
VRK1-205ENST00000555402 FAM240AA0A1B0GVK7 77 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 CENPBD1B2RD01 187 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 F8VP50 259 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 F8VZ95 297 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 PRAMEF26H0Y7S4 382 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 MKRN2OSH3BPM6 223 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 J3QT63 122 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 GATCO43716 136 aaKnown RBP3.15□□□□□ -1.91
VRK1-205ENST00000555402 CCDC22O60826 627 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 SCO1O75880 301 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 OR5AL1P0C617 328 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 TEAD1P28347 426 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 MAGEA6P43360 314 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 CDC34P49427 236 aaPredicted RBP3.15□□□□□ -1.91
VRK1-205ENST00000555402 UBE2KP61086 200 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 PPP1CAP62136 330 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 EPGNQ6UW88 154 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 SETD3Q86TU7 594 aaPredicted RBP3.15□□□□□ -1.91
VRK1-205ENST00000555402 CRLF3Q8IUI8 442 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 ZNF709Q8N972 641 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 UBA3Q8TBC4 463 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 ZFAND1Q8TCF1 268 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 SFXN5Q8TD22 340 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 CPNE4Q96A23 557 aaPredicted RBP3.15□□□□□ -1.91
VRK1-205ENST00000555402 ZFP3Q96NJ6 502 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 POTEKPQ9BYX7 375 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 SRRQ9GZT4 340 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 ENPP4Q9Y6X5 453 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 DOCK8Q8NF50 2099 aa3.15□□□□□ -1.91
VRK1-205ENST00000555402 TSPOAP1O95153 1857 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 ISPDA4D126 451 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 LRCOL1A6NCL2 159 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 COLCA2A8K830 154 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 LIN7AO14910 233 aaPredicted RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 ENSAO43768 121 aaKnown RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 ZNF286BP0CG31 522 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 SYT1P21579 422 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 UGT2B10P36537 528 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 PSMB2P49721 201 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 LAMTOR4Q0VGL1 99 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 MAD2L1BPQ15013 274 aaPredicted RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 BCL2A1Q16548 175 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 PAGE2Q7Z2X7 111 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 DCXRQ7Z4W1 244 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 OR8J2Q8NGG1 315 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 OR6K2Q8NGY2 324 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 CDC26Q8NHZ8 85 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 RTN4IP1Q8WWV3 396 aaPredicted RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 MRPL48Q96GC5 212 aaKnown RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 C20orf144Q9BQM9 153 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 MARVELD1Q9BSK0 173 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 SLC38A1Q9H2H9 487 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 WDR55Q9H6Y2 383 aaPredicted RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 IMP3Q9NV31 184 aaKnown RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 NAGKQ9UJ70 344 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 ORC6Q9Y5N6 252 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 FADS3Q9Y5Q0 445 aa3.14□□□□□ -1.91
VRK1-205ENST00000555402 AHDC1Q5TGY3 1603 aaPredicted RBP3.14□□□□□ -1.91
VRK1-205ENST00000555402 A0A0A6YYH2 397 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 CCL15-CCL14A0A0B4J2E2 113 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 TMEM213A2RRL7 107 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 FABP12A6NFH5 140 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 A6NJ64 397 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 K7EN84 100 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 AQP9O43315 295 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 ATP5HO75947 161 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 RCBTB2O95199 551 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 TNFAIP8O95379 198 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 IGLV2-8P01709 118 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 LIPCP11150 499 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 PSMB5P28074 263 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 HOXA6P31267 233 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 PRSS3P35030 304 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 DNASE1L1P49184 302 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 RGS6P49758 472 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 XKP51811 444 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 EMP2P54851 167 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 VSNL1P62760 191 aa3.13□□□□□ -1.91
VRK1-205ENST00000555402 BASP1P80723 227 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms