RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 FAM46BQ96A09 425 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 SLAMF9Q96A28 289 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 SLC25A38Q96DW6 304 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 DIRAS2Q96HU8 199 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 TRAF4Q9BUZ4 470 aaPredicted RBP12.17□□□□□ -0.46
SHOX2-206ENST00000554685 RAB1BQ9H0U4 201 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 SAP30LQ9HAJ7 183 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 HMG20AQ9NP66 347 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 DIABLOQ9NR28 239 aa12.17□□□□□ -0.46
SHOX2-206ENST00000554685 IGKV1-12A0A0C4DH73 117 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 hCG_1807616A0A1W2PRN6 198 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 LRRC30A6NM36 301 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 SYNGR1O43759 233 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 TPPPO94811 219 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 IGKV1D-12P01611 117 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 EIF4EP06730 217 aaKnown RBP12.16□□□□□ -0.46
SHOX2-206ENST00000554685 CHRM2P08172 466 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 PGA5P0DJD9 388 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 IRF2P14316 349 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 ELK1P19419 428 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 CPT2P23786 658 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 ETV6P41212 452 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 FGF12P61328 243 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 RPS27AP62979 156 aaKnown RBP12.16□□□□□ -0.46
SHOX2-206ENST00000554685 ZNF45Q02386 682 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 UNC119Q13432 240 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 NHLRC3Q5JS37 347 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 C11orf71Q6IPW1 123 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 LINC00596Q86U02 117 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 CCDC190Q86UF4 302 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 MOGAT3Q86VF5 341 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 Q8NFD4 153 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 OR56B1Q8NGI3 324 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 OR10K1Q8NGX5 313 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 Q8TCH9 128 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 C15orf40Q8WUR7 153 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 C14orf79Q96F83 325 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 NUDT16L1Q9BRJ7 211 aaKnown RBP12.16□□□□□ -0.46
SHOX2-206ENST00000554685 WDR12Q9GZL7 423 aaKnown RBP12.16□□□□□ -0.46
SHOX2-206ENST00000554685 ATG5Q9H1Y0 275 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 UFSP2Q9NUQ7 469 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 C1orf123Q9NWV4 160 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 RASL12Q9NYN1 266 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 EXTL2Q9UBQ6 330 aa12.16□□□□□ -0.46
SHOX2-206ENST00000554685 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.46
SHOX2-206ENST00000554685 A0A1W2PPR1 153 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A10PA6NDY2 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A18PA6NE21 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A16PA6NEW6 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A20PA6NIJ5 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A8PA6NJQ4 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A7PA6NKC0 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A22PA8MWA6 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A12PA8MX19 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A5PA8MXJ8 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A23PA8MXZ1 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 CLDN25C9JDP6 229 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 AKR7A2O43488 359 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 NXPH2O95156 264 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 SOD3P08294 240 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A15PP0C7V4 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A13PP0C7W8 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A14PP0C7W9 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 BCL3P20749 454 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 PTBP1P26599 531 aaKnown RBP eCLIP12.15□□□□□ -0.46
SHOX2-206ENST00000554685 NR4A2P43354 598 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 CCL8P80075 99 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 ARL6IP1Q15041 203 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 MPPED2Q15777 294 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 ZNF181Q2M3W8 571 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 OR10K2Q6IF99 312 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 CNIH2Q6PI25 160 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 WDR82Q6UXN9 313 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 CMTM4Q8IZR5 234 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 C1orf87Q8N0U7 546 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 NEU4Q8WWR8 484 aaPredicted RBP12.15□□□□□ -0.46
SHOX2-206ENST00000554685 EMG1Q92979 244 aaKnown RBP12.15□□□□□ -0.46
SHOX2-206ENST00000554685 VRK1Q99986 396 aaPredicted RBP12.15□□□□□ -0.46
SHOX2-206ENST00000554685 NRIP2Q9BQI9 281 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 TM2D1Q9BX74 207 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 SELENOIQ9C0D9 397 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 BANF2Q9H503 90 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
SHOX2-206ENST00000554685 FABP12A6NFH5 140 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 H7C417 338 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 RHBDL1O75783 438 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 CD8AP01732 235 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 SFTPBP07988 381 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 SSTR2P30874 369 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 PITPNBP48739 271 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 EFNB2P52799 333 aa12.14□□□□□ -0.47
SHOX2-206ENST00000554685 RBM11P57052 281 aaKnown RBP12.14□□□□□ -0.47
SHOX2-206ENST00000554685 ERVK11-1P61568 191 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms