RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 BSPH1Q075Z2 132 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 PSG7Q13046 419 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 HLXQ14774 488 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 RSU1Q15404 277 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 KISS1Q15726 138 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 UBE2V2Q15819 145 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 C2orf76Q3KRA6 126 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 UBE2NLQ5JXB2 153 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 HES5Q5TA89 166 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 AWAT2Q6E213 333 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 RAB12Q6IQ22 244 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 RFPL4BQ6ZWI9 263 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 OR2W3Q7Z3T1 314 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 SAXO1Q8IYX7 474 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 LILRB2Q8N423 598 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 PAQR4Q8N4S7 273 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 PXT1Q8NFP0 134 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 OR52N4Q8NGI2 321 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 OR6Q1Q8NGQ2 317 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 TRMT10AQ8TBZ6 339 aaKnown RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 ERGIC1Q969X5 290 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 MRPL24Q96A35 216 aaKnown RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 FAM3DQ96BQ1 224 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 ORAI1Q96D31 301 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 MRPS24Q96EL2 167 aaKnown RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 WDFY2Q96P53 400 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 SLC30A2Q9BRI3 323 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 SOX7Q9BT81 388 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 BARHL1Q9BZE3 327 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 CST11Q9H112 138 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 ABCG5Q9H222 651 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 MS4A5Q9H3V2 200 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 PLK3Q9H4B4 646 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 FAIMQ9NVQ4 179 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 CISD1Q9NZ45 108 aaKnown RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 NPAP1Q9NZP6 1156 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 TAAR3PQ9P1P4 343 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 ZMAT5Q9UDW3 170 aaKnown RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 ZDHHC8Q9ULC8 765 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 MRPS28Q9Y2Q9 187 aaKnown RBP4.27□□□□□ -1.73
VTI1B-202ENST00000553619 RHBDD3Q9Y3P4 386 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 RNF115Q9Y4L5 304 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 CEP295Q9C0D2 2601 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 SPTA1P02549 2419 aa4.27□□□□□ -1.73
VTI1B-202ENST00000553619 A0A0A6YYH2 397 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 IGKV1-9A0A0C4DH69 117 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 A0A0G2JK05 382 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-202ENST00000553619 UBE2QL1A1L167 161 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 LRP5LA4QPB2 252 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 C5orf63A6NC05 138 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 FABP12A6NFH5 140 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 A6NJ64 397 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF732B4DXR9 585 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ATP6V1G2-DDX39BF2Z307 99 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TRAPPC2LH3BP13 241 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 IFNL4K9M1U5 179 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 LMX1BO60663 402 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 NCR1O76036 304 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 APOA1P02647 267 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ACAA1P09110 424 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-202ENST00000553619 OR4A8P0C604 315 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 SLC2A2P11168 524 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-202ENST00000553619 GTF2F2P13984 249 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ADRA2CP18825 462 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 CA6P23280 308 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 CD40LGP29965 261 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 CCKARP32238 428 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TNFSF8P32971 234 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 SERPINF1P36955 418 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 MPV17P39210 176 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ETV6P41212 452 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 NR4A2P43354 598 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 HAAOP46952 286 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 POU3F4P49335 361 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF81P51508 661 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 PPP5CP53041 499 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 CAV3P56539 151 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 OR10A3P58181 314 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ERVS71-1P61550 626 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 MRPS10P82664 201 aaKnown RBP4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TFF3Q07654 80 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 IL24Q13007 206 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 PDZK1IP1Q13113 114 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TNK1Q13470 666 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 FAM76BQ5HYJ3 339 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 SPATA46Q5T0L3 261 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 FAM166AQ6J272 317 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ADAM5Q6NVV9 412 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 FIP1L1Q6UN15 594 aaKnown RBP4.26□□□□□ -1.73
VTI1B-202ENST00000553619 GLIPR1L1Q6UWM5 242 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 FAM131AQ6UXB0 335 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 ASCL4Q6XD76 172 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 MYPOPQ86VE0 399 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-202ENST00000553619 TMEM200AQ86VY9 491 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 Q8IYB0 196 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 OR5AS1Q8N127 324 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 FBXL14Q8N1E6 418 aa4.26□□□□□ -1.73
VTI1B-202ENST00000553619 SAMD12Q8N8I0 201 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms