RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TATDN3Q17R31 274 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 ZNF718Q3SXZ3 478 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 ELP2Q6IA86 826 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 STEAP1BQ6NZ63 245 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 HAGHLQ6PII5 290 aaPredicted RBP16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 WDR86Q86TI4 376 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 ZNF573Q86YE8 665 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 OR8G5Q8NG78 346 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 OR8S1Q8NH09 359 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 SLAMF9Q96A28 289 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 PCDHB16Q9NRJ7 776 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 MCUBQ9NWR8 336 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 FZR1Q9UM11 496 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 ADGRG4Q8IZF6 3080 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 F8VVB4 439 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 F8VWA3 439 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 GEMIN2O14893 280 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 SYNGR1O43759 233 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 CYB5AP00167 134 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 AKAIN1P0CW23 69 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 GNG2P59768 71 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 MSMPQ1L6U9 139 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 OR10A4Q9H209 315 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 OSGIN2Q9Y236 505 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 ST3GAL6Q9Y274 331 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 NOP16Q9Y3C1 178 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 RELNP78509 3460 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 CD74P04233 296 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 BCL3P20749 454 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 MPZP25189 248 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 RCVRNP35243 200 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 FAUP35544 74 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 NKX6-1P78426 367 aaPredicted RBP16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 BTN2A1Q7KYR7 527 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 C6orf201Q7Z4U5 140 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 OR4S1Q8NGB4 309 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 CHAC2Q8WUX2 184 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 ADAT1Q9BUB4 502 aaKnown RBP16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 RTL8AQ9BWD3 113 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 ANAPC10Q9UM13 185 aa16.68■□□□□ 0.26
RBFOX1-215ENST00000553186 TRAV6A0A075B6T7 132 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 RBM11P57052 281 aaKnown RBP16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 RAB25P57735 213 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 BTG1P62324 171 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 MKXQ8IYA7 352 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 BATF2Q8N1L9 274 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 HS3ST6Q96QI5 342 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 MICU1Q9BPX6 476 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 PKIBQ9C010 78 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 CADP27708 2225 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 ZNF736B4DX44 427 aaPredicted RBP16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 H0YL77 283 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 THBDP07204 575 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 HLA-DMAP28067 261 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 GCH1P30793 250 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 IL24Q13007 206 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 ARL6IP1Q15041 203 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 OCSTAMPQ9BR26 566 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 TMEM100Q9NV29 134 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 PLEKHJ1Q9NW61 149 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 POU2F3Q9UKI9 436 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 HSF4Q9ULV5 492 aa16.67■□□□□ 0.26
RBFOX1-215ENST00000553186 CCL21O00585 134 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 MLNRO43193 412 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 CD40P25942 277 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 CHATP28329 748 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 FGF12P61328 243 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 CD300CQ08708 224 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 OR52W1Q6IF63 320 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 RGS7BPQ6MZT1 257 aaPredicted RBP16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 Q6ZR03 302 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 OR10AD1Q8NGE0 317 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 OR56B4Q8NH76 319 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 FBXW5Q969U6 566 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 POM121Q96HA1 1249 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 ACACBO00763 2458 aa16.66■□□□□ 0.26
RBFOX1-215ENST00000553186 TIMM8AO60220 97 aaPredicted RBP16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 CA11O75493 328 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 RAB3DO95716 219 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 GLRXP35754 106 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 NHLRC3Q5JS37 347 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 SNAPC3Q92966 411 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 RADILQ96JH8 1075 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 TINAGL1Q9GZM7 467 aaPredicted RBP16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 C20orf85Q9H1P6 137 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 SPEF1Q9Y4P9 236 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 ALG5Q9Y673 324 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 A0A1B0GWJ7 208 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 LRP5LA4QPB2 252 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 ATP6V1G2-DDX39BF2Z307 99 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 TRAPPC2LH3BP13 241 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 J3QT63 122 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 M0QYG6 137 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 RHBDL1O75783 438 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 ZNF250P15622 560 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 NAT1P18440 290 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 RAG2P55895 527 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 ZNF154Q13106 437 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 ARFRP1Q13795 201 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms