RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 IFT52Q9Y366 437 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 MOB4Q9Y3A3 225 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 JRKLQ9Y4A0 524 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 GMEB1Q9Y692 573 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 CEPT1Q9Y6K0 416 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 HSPE1-MOB4S4R3N1 261 aa1.7□□□□□ -2.14
PTCH1-223ENST00000551623 IGKV1D-17A0A075B6S4 117 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 A0A0G2JPF8 293 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 IGHV3-64DA0A0J9YX35 117 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 A0A1W2PQ09 198 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CD300LBA8K4G0 201 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 HNRNPCL2B2RXH8 293 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 HNRNPCL3B7ZW38 293 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 LRRN3E7EW58 273 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 H0YAE9 185 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 IMPA2O14732 288 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OVOL1O14753 267 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CHP2O43745 196 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 AHCYL1O43865 530 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 TPST2O60704 377 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 HNRNPCL1O60812 293 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 PTP4A3O75365 173 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 SAP30O75446 220 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 TRMUO75648 421 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 LYPD3O95274 346 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 BRI3O95415 125 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 IGLV1-47P01700 117 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 AMBPP02760 352 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 IGF1P05019 195 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ZCCHC18P0CG32 403 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 RBMY1A1P0DJD3 496 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 INAFM2P0DMQ5 153 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 HNRNPCL4P0DMR1 293 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 TAC1P20366 129 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CA6P23280 308 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CD34P28906 385 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 BRS3P32247 399 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 DDOSTP39656 456 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 NAA10P41227 235 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 SERPINB9P50453 376 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CRISP3P54108 245 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR12D2P58182 307 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 LINC01547P58512 204 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ISL1P61371 349 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ELF3P78545 371 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 BDH1Q02338 343 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 FMODQ06828 376 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 RPL18Q07020 188 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 MZT1Q08AG7 82 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 LRRC74AQ0VAA2 488 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 EBI3Q14213 229 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 MELKQ14680 651 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR8G1Q15617 311 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 GPAT3Q53EU6 434 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CXorf66Q5JRM2 361 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 FGD3Q5JSP0 725 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 C6orf136Q5SQH8 315 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ANXA8L1Q5VT79 327 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 TNFAIP8L2Q6P589 184 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF613Q6PF04 617 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 DHRS4L2Q6PKH6 230 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 TIFABQ6ZNK6 161 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CFAP77Q6ZQR2 320 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ZCCHC23Q6ZST2 131 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ZNF826PQ6ZT77 177 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 HMGN2P46Q86SG4 172 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 RANBP3LQ86VV4 465 aaPredicted RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CTAGE3PQ8IX95 158 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CLECL1Q8IZS7 167 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CLEC4FQ8N1N0 589 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 KRTCAP2Q8N6L1 136 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 C5orf56Q8N8D9 126 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR11H1Q8NG94 326 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR4M1Q8NGD0 313 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR4P4Q8NGL7 312 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR13D1Q8NGV5 346 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR10Z1Q8NGY1 313 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OR1F12Q8NHA8 337 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 TCP10LQ8TDR4 215 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 SLC38A5Q8WUX1 472 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 HDAC2Q92769 488 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 MS4A14Q96JA4 679 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 MPP4Q96JB8 637 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 PPP3R2Q96LZ3 170 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ZIM3Q96PE6 472 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 COQ7Q99807 217 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 FAM110AQ9BQ89 295 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OVOL2Q9BRP0 275 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 DESI2Q9BSY9 194 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 ADAT1Q9BUB4 502 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 CADM1Q9BY67 442 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 PAIP1Q9H074 479 aaKnown RBP1.69□□□□□ -2.14
PTCH1-223ENST00000551623 DPH5Q9H2P9 285 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 GHITMQ9H3K2 345 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 OPA3Q9H6K4 179 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 RETNQ9HD89 108 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 MID1IP1Q9NPA3 183 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 C1orf123Q9NWV4 160 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 TMEM216Q9P0N5 145 aa1.69□□□□□ -2.14
PTCH1-223ENST00000551623 DNAJB9Q9UBS3 223 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms