RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 Q6ZSV7 163 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 FAM220AQ7Z4H9 259 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 BCDIN3DQ7Z5W3 292 aaKnown RBP8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 CATSPERDQ86XM0 798 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 ENTHD1Q8IYW4 607 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR10H4Q8NGA5 316 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 PPP1R14AQ96A00 147 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 CIB1Q99828 191 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 GABARAPL3Q9BY60 117 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 TTTY10Q9BZA0 68 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 SEBOXQ9HB31 216 aaPredicted RBP8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 HES4Q9HCC6 221 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 TCF7L1Q9HCS4 588 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 GPR173Q9NS66 373 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 FBLN5Q9UBX5 448 aa8.89□□□□□ -0.99
VTI1BP3-201ENST00000550220 A0A1W2PQL4 384 aaPredicted RBP8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 A0A1W2PRD5 423 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 A0A1W2PRF3 423 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 A0A1W2PRM7 423 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 H3BUI4 141 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 K7N7A8 449 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 WIPF1O43516 503 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 SYNGR1O43759 233 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 ANGPTL7O43827 346 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 CYB5AP00167 134 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 RBP4P02753 201 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 TK1P04183 234 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 RPSAP08865 295 aaKnown RBP8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 UBCP0CG48 685 aaKnown RBP8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 EPHA2P29317 976 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 GABRA5P31644 462 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 ERVK11-1P61568 191 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 CNN3Q15417 329 aaKnown RBP8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 LRRC75BQ2VPJ9 315 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 MEDAGQ5VYS4 303 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 AMIGO2Q86SJ2 522 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 EGFL6Q8IUX8 553 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 Q8IYB0 196 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 CD177Q8N6Q3 437 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 DNAAF1Q8NEP3 725 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 PP6455Q8WZ26 134 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 UBE2FQ969M7 185 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 SSX3Q99909 188 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 CDCA4Q9BXL8 241 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 CHST5Q9GZS9 411 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 C19orf12Q9NSK7 152 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 OAZ3Q9UMX2 235 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 ORC6Q9Y5N6 252 aa8.88□□□□□ -0.99
VTI1BP3-201ENST00000550220 FAM230AA0A1W2PPH8 454 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 MAGEB4O15481 346 aaPredicted RBP8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 TFF1P04155 84 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 KIR2DS4P43632 304 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 ACTC1P68032 377 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 ACTA1P68133 377 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 KLRD1Q13241 179 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 DMRTC1Q5HYR2 192 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 SLC25A30Q5SVS4 291 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 TMEM244Q5VVB8 128 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 HCP5Q6MZN7 132 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 GDPD3Q7L5L3 318 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 MKXQ8IYA7 352 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR4C13Q8NGP0 309 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR13D1Q8NGV5 346 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 RORBQ92753 470 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 BORCS8Q96FH0 119 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 MRPL48Q96GC5 212 aaKnown RBP8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 CEP19Q96LK0 163 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 ZNF488Q96MN9 340 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 TBX5Q99593 518 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 SEMA6AQ9H2E6 1030 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 PPA2Q9H2U2 334 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 RIBC2Q9H4K1 309 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 RANBP3Q9H6Z4 567 aaPredicted RBP8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 ELL3Q9HB65 397 aaPredicted RBP8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 NEK6Q9HC98 313 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 IMPAD1Q9NX62 359 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR14J1Q9UGF5 321 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 GLS2Q9UI32 602 aa8.87□□□□□ -0.99
VTI1BP3-201ENST00000550220 hADV38S2A0JD32 116 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 C17orf98A8MV24 154 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 VGLL3A8MV65 326 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 H3BUX3 64 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 M0R129 80 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 PRKACBP22694 351 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 RBP2P50120 134 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 ATP1B3P54709 279 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 MEF2CQ06413 473 aaPredicted RBP8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 SRSF4Q08170 494 aaKnown RBP8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 UBE2V2Q15819 145 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 C2orf68Q2NKX9 166 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 ASPHD2Q6ICH7 369 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 SLC35E4Q6ICL7 350 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 ZFP1Q6P2D0 407 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 Q6ZTK2 550 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 ANGPTL5Q86XS5 388 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 PNKDQ8N490 385 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 C11orf42Q8N5U0 333 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 ASCC1Q8N9N2 400 aaKnown RBP8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 PPP1R35Q8TAP8 253 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 TRMT10AQ8TBZ6 339 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms