RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 OR6C65A6NJZ3 312 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 RFPL4AA6NLU0 287 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 RFPL4AL1F8VTS6 287 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 PIGYQ3MUY2 71 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 TMEM88Q6PEY1 159 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 C9orf62Q8N4C0 152 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 LRRC46Q96FV0 321 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 CTDSPLO15194 276 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 LSM6P62312 80 aaKnown RBP13.19□□□□□ -0.3
CUX1-214ENST00000550008 HIKESHIQ53FT3 197 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 SPANXN5Q5MJ07 72 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 SFT2D1Q8WV19 159 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 RBMXL1Q96E39 390 aaKnown RBP13.19□□□□□ -0.3
CUX1-214ENST00000550008 SOX7Q9BT81 388 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 ZNF426Q9BUY5 554 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 GCM1Q9NP62 436 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 IL17BQ9UHF5 180 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 CYB5R1Q9UHQ9 305 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 PROCRQ9UNN8 238 aa13.19□□□□□ -0.3
CUX1-214ENST00000550008 TMEM127O75204 238 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 IFNA10P01566 189 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 CRYAAP02489 173 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
CUX1-214ENST00000550008 EIF3IQ13347 325 aaKnown RBP13.18□□□□□ -0.3
CUX1-214ENST00000550008 MSMO1Q15800 293 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 PNLIPRP3Q17RR3 467 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 MICBQ29980 383 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 WFDC8Q8IUA0 241 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 GHITMQ9H3K2 345 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 LHFPL6Q9Y693 200 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 HEATR5AQ86XA9 2040 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 PRR32B1ATL7 298 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 NDUFB7P17568 137 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 GSK3AP49840 483 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 OR2G3Q8NGZ4 309 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 GPX8Q8TED1 209 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 VSIG10L2P0DP72 767 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 PEA15Q15121 130 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 ADAD2Q8NCV1 583 aaKnown RBP13.18□□□□□ -0.3
CUX1-214ENST00000550008 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 B3GAT1Q9P2W7 334 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 OPN4Q9UHM6 478 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 TRAF3IP2O43734 574 aaPredicted RBP13.18□□□□□ -0.3
CUX1-214ENST00000550008 FOSL1P15407 271 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 KLK2P20151 261 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 TESK1Q15569 626 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 DCAF12L2Q5VW00 463 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 Q6ZRG5 221 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 ZNF519Q8TB69 540 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 KCNK7Q9Y2U2 307 aa13.18□□□□□ -0.3
CUX1-214ENST00000550008 IFNA1P01562 189 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 Q5BKY6 102 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 OR2W3Q7Z3T1 314 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 PLEKHF2Q9H8W4 249 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 KLK13Q9UKR3 277 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 FER1L5A0AVI2 2057 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 SNAPINO95295 136 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 FGF5P12034 268 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 SRPXP78539 464 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 TMEM255AQ5JRV8 349 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 CDCP2Q5VXM1 449 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 OR2M7Q8NG81 312 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 PECRQ9BY49 303 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 TGIF2Q9GZN2 237 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 PLK3Q9H4B4 646 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 GPR35Q9HC97 309 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 GPR160Q9UJ42 338 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 TRAV17A0A0B4J275 112 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 SH2D1BO14796 132 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 LYPD3O95274 346 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 ONECUT2O95948 504 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 ZNF83P51522 516 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 FOXC1Q12948 553 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 OR5AP2Q8NGF4 316 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 SLC7A10Q9NS82 523 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 THADAQ6YHU6 1953 aa13.17□□□□□ -0.3
CUX1-214ENST00000550008 MPC2O95563 127 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 ECI1P42126 302 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 SCAND1P57086 179 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 GNG3P63215 75 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 ROM1Q03395 351 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 AANATQ16613 207 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 CADP27708 2225 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 BMP5P22003 454 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 PLGLAQ15195 96 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 HEYLQ9NQ87 328 aaPredicted RBP13.16□□□□□ -0.3
CUX1-214ENST00000550008 TMEM38BQ9NVV0 291 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 ERRFI1Q9UJM3 462 aaPredicted RBP13.16□□□□□ -0.3
CUX1-214ENST00000550008 C7orf66A4D0T2 115 aa13.16□□□□□ -0.3
CUX1-214ENST00000550008 TTLL8A6PVC2 850 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms