RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 PBOV1Q9GZY1 135 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 VCXQ9H320 206 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 ZNF556Q9HAH1 456 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 GPR84Q9NQS5 396 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 NUFIP1Q9UHK0 495 aaKnown RBP10.41□□□□□ -0.74
PTCH1-218ENST00000548945 ENPP5Q9UJA9 477 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 PIGLQ9Y2B2 252 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 POLDIP2Q9Y2S7 368 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 TBL2Q9Y4P3 447 aaKnown RBP10.41□□□□□ -0.74
PTCH1-218ENST00000548945 TMEM14AQ9Y6G1 99 aa10.41□□□□□ -0.74
PTCH1-218ENST00000548945 GNGT2O14610 69 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 DHRS3O75911 302 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 NRASP01111 189 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 FAHP16930 419 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 MPZP25189 248 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 BMXP51813 675 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 RPS7P62081 194 aaKnown RBP10.4□□□□□ -0.74
PTCH1-218ENST00000548945 COMMD2Q86X83 199 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 BBS1Q8NFJ9 593 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 OR4F17Q8NGA8 305 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 OR2T27Q8NH04 317 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 OR51E1Q8TCB6 317 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 RPS4Y2Q8TD47 263 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 WIPF2Q8TF74 440 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-218ENST00000548945 EME1Q96AY2 570 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 OR4F4Q96R69 305 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 SLC25A19Q9HC21 320 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 C8orf4Q9NR00 106 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 SERTAD4Q9NUC0 356 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 PITPNC1Q9UKF7 332 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 TCF19Q9Y242 345 aa10.4□□□□□ -0.74
PTCH1-218ENST00000548945 PQLC2LA1A4F0 135 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 DHRS7CA6NNS2 312 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 C17orf98A8MV24 154 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 ODF3BA8MYP8 253 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 DLGAP1O14490 977 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 ALX3O95076 343 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 NXPH2O95156 264 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 TK1P04183 234 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 ANXA8P13928 327 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 PAX6P26367 422 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 HAAOP46952 286 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 DYNLT3P51808 116 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 RIDAP52758 137 aaKnown RBP10.39□□□□□ -0.75
PTCH1-218ENST00000548945 DLX6P56179 175 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 APOFQ13790 326 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 CNN3Q15417 329 aaKnown RBP10.39□□□□□ -0.75
PTCH1-218ENST00000548945 CLVS2Q5SYC1 327 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 LPCAT4Q643R3 524 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 TMEM42Q69YG0 159 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 TMEM179BQ7Z7N9 219 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 OR13D1Q8NGV5 346 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 MALSU1Q96EH3 234 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 TEAD3Q99594 435 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 NKX3-1Q99801 234 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-218ENST00000548945 C9orf16Q9BUW7 83 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 MOB1AQ9H8S9 216 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 NECAP2Q9NVZ3 263 aa10.39□□□□□ -0.75
PTCH1-218ENST00000548945 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.39□□□□□ -0.75
PTCH1-218ENST00000548945 A6NDX4 124 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 K7N7A8 449 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 SYNGR1O43759 233 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 CCL3L1P16619 93 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 COX7A1P24310 79 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 HCCSP53701 268 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 LOXL3P58215 753 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF273Q14593 569 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 LRRC36Q1X8D7 754 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF626Q68DY1 528 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 Q6ZSR3 168 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 LHFPL4Q7Z7J7 247 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 PACRGLQ8N7B6 248 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 OR4M1Q8NGD0 313 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF488Q96MN9 340 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 CIB1Q99828 191 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 PRSS22Q9GZN4 317 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 WNT10AQ9GZT5 417 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 ABCB10Q9NRK6 738 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 OAZ3Q9UMX2 235 aa10.38□□□□□ -0.75
PTCH1-218ENST00000548945 KIAA2026Q5HYC2 2103 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 SAC3D1A6NKF1 404 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 PSMD9O00233 223 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 SRSF10O75494 262 aaKnown RBP10.37□□□□□ -0.75
PTCH1-218ENST00000548945 TTRP02766 147 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 PRB2P02812 416 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-218ENST00000548945 ALDOBP05062 364 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 ZNF728P0DKX0 622 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 CD28P10747 220 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 CEBPDP49716 269 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-218ENST00000548945 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 IL24Q13007 206 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 NSUN5P1Q3KNT7 163 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
PTCH1-218ENST00000548945 DMRTC1Q5HYR2 192 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms