RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 FAM90A22PA8MWA6 464 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 ZNF254O75437 659 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 DHRS3O75911 302 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 CLIC3O95833 236 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 HMGN1P05114 100 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 ATP6V1B2P21281 511 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 HSP90B2PQ58FF3 399 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 C16orf82Q7Z2V1 217 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 CENPVQ7Z7K6 275 aaPredicted RBP16.07■□□□□ 0.16
GATC-202ENST00000548171 DEFB107AQ8IZN7 70 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 AKR1E2Q96JD6 320 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 WWC2-AS2Q96NR7 200 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 FEVQ99581 238 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 YIPF3Q9GZM5 350 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 PBOV1Q9GZY1 135 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 TAS2R1Q9NYW7 299 aa16.07■□□□□ 0.16
GATC-202ENST00000548171 NUFIP1Q9UHK0 495 aaKnown RBP16.07■□□□□ 0.16
GATC-202ENST00000548171 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.07■□□□□ 0.16
GATC-202ENST00000548171 TCRBV5S2A0A599 114 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 TCRBV4S1A1TA0A5B7 111 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 PQLC2LA1A4F0 135 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 ARRDC5A6NEK1 342 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 DLGAP1O14490 977 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 VSIG8P0DPA2 414 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 MPZP25189 248 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 RPS7P62081 194 aaKnown RBP16.06■□□□□ 0.16
GATC-202ENST00000548171 MEF2CQ06413 473 aaPredicted RBP16.06■□□□□ 0.16
GATC-202ENST00000548171 SLC34A1Q06495 639 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 GINS1Q14691 196 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 ZNF829Q3KNS6 432 aaPredicted RBP16.06■□□□□ 0.16
GATC-202ENST00000548171 CLVS2Q5SYC1 327 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 TMEM42Q69YG0 159 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 GDPD3Q7L5L3 318 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 CPOQ8IVL8 374 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 ASCC1Q8N9N2 400 aaKnown RBP16.06■□□□□ 0.16
GATC-202ENST00000548171 GIPC3Q8TF64 312 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 ZNF714Q96N38 554 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 TEAD3Q99594 435 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 TAGLN3Q9UI15 199 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 SLC22A13Q9Y226 551 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 HILPDAQ9Y5L2 63 aa16.06■□□□□ 0.16
GATC-202ENST00000548171 ZNF737O75373 536 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 DNAJC8O75937 253 aaPredicted RBP16.05■□□□□ 0.16
GATC-202ENST00000548171 EDDM3BP56851 147 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 ERVK11-1P61568 191 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 ROM1Q03395 351 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 COL10A1Q03692 680 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 EGFEM1PQ0D2K5 195 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 IL18R1Q13478 541 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 FAM98BQ52LJ0 330 aaKnown RBP16.05■□□□□ 0.16
GATC-202ENST00000548171 TCTEX1D4Q5JR98 221 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 ZBTB49Q6ZSB9 765 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 ZNF679Q8IYX0 411 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 OR4X2Q8NGF9 303 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 GPR61Q9BZJ8 451 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 PKIBQ9C010 78 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 DNAJB9Q9UBS3 223 aa16.05■□□□□ 0.16
GATC-202ENST00000548171 WI2-2373I1.2A0A1W2PRP0 233 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 hADV38S2A0JD32 116 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 E9PQ18 207 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 E2F6O75461 281 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 CHRM2P08172 466 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 SLC2A5P22732 501 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 KRTAP10-11P60412 298 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 ACTA2P62736 377 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 ACTG2P63267 376 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 ACTC1P68032 377 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 ACTA1P68133 377 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 CD69Q07108 199 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 CCDC121Q6ZUS5 278 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 OR8H2Q8N162 312 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 NDNFQ8TB73 568 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 ASB17Q8WXJ9 295 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 DPF1Q92782 380 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 B9D2Q9BPU9 175 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 LIN7BQ9HAP6 207 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 TMEM14AQ9Y6G1 99 aa16.04■□□□□ 0.16
GATC-202ENST00000548171 PSMD9O00233 223 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 TTRP02766 147 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 RIDAP52758 137 aaKnown RBP16.03■□□□□ 0.16
GATC-202ENST00000548171 HCCSP53701 268 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 IL24Q13007 206 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 DCTN2Q13561 401 aaKnown RBP16.03■□□□□ 0.16
GATC-202ENST00000548171 ASRGL1Q7L266 308 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 PIGWQ7Z7B1 504 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 DHFR2Q86XF0 187 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 BBS1Q8NFJ9 593 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 CAPSLQ8WWF8 208 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 MYDGFQ969H8 173 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 CLEC7AQ9BXN2 247 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 TEX12Q9BXU0 123 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 MOB1AQ9H8S9 216 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 GPR173Q9NS66 373 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 SESN1Q9Y6P5 492 aa16.03■□□□□ 0.16
GATC-202ENST00000548171 IGHV2-26A0A0B4J1V2 119 aa16.02■□□□□ 0.16
GATC-202ENST00000548171 DHRS7CA6NNS2 312 aa16.02■□□□□ 0.16
GATC-202ENST00000548171 SNX3O60493 162 aa16.02■□□□□ 0.16
GATC-202ENST00000548171 JUNBP17275 347 aaPredicted RBP16.02■□□□□ 0.16
GATC-202ENST00000548171 ESRRGP62508 458 aa16.02■□□□□ 0.16
GATC-202ENST00000548171 BATF2Q8N1L9 274 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms