RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ALX3O95076 343 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 AGFG2O95081 481 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 IGKV1D-12P01611 117 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 CELA3BP08861 270 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 CST2P09228 141 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 H3F3CQ6NXT2 135 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 COMMD7Q86VX2 200 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF75AQ96N20 296 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 ITGB1BP2Q9UKP3 347 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 KLF13Q9Y2Y9 288 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-209ENST00000547018 SLC22A20A6NK97 555 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 SULT1C2O00338 296 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 NXPH3O95157 252 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 S100A11P31949 105 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 NOVA1P51513 510 aaKnown RBP11.02□□□□□ -0.65
SCAF11-209ENST00000547018 HAGHLQ6PII5 290 aaPredicted RBP11.02□□□□□ -0.65
SCAF11-209ENST00000547018 NARS2Q96I59 477 aaKnown RBP11.02□□□□□ -0.65
SCAF11-209ENST00000547018 GPR137Q96N19 417 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 EMC3Q9P0I2 261 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 AK3Q9UIJ7 227 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 A0A0U1RQV5 110 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 RP2O75695 350 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 CRYGSP22914 178 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 CA6P23280 308 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 PCBD1P61457 104 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 ERVS71-1P61550 626 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 LY6G6FQ5SQ64 297 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 ELP2Q6IA86 826 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 OR13G1Q8NGZ3 307 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 MBD2Q9UBB5 411 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 SPRR3Q9UBC9 169 aa11.02□□□□□ -0.65
SCAF11-209ENST00000547018 OR6C6A6NF89 314 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 ZNF732B4DXR9 585 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 F5H0A9 414 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 SPIN3Q5JUX0 258 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 ZNF585AQ6P3V2 769 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 SLC22A25Q6T423 547 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 LYG2Q86SG7 212 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 SPICQ8N5J4 248 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 CXorf58Q96LI9 332 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 SMIM3Q9BZL3 60 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 B3GNT2Q9NY97 397 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 TNRC6AQ8NDV7 1962 aaKnown RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 DOCK11Q5JSL3 2073 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 PLSCR5A0PG75 271 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 EFSO43281 561 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 LUMP51884 338 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 EIF3IQ13347 325 aaKnown RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 CLVS2Q5SYC1 327 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 ABLIM2Q6H8Q1 611 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 MEX3BQ6ZN04 569 aaKnown RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 HIST1H2AAQ96QV6 131 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 C5orf66Q9H5L9 145 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 MAP1AP78559 2803 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 MFNGO00587 321 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 CPN1P15169 458 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 ZNF708P17019 499 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 CNN3Q15417 329 aaKnown RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 OR5L1Q8NGL2 311 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 ADAMTS17Q8TE56 1095 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 IL1F10Q8WWZ1 152 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 DCUN1D4Q92564 292 aa11.01□□□□□ -0.65
SCAF11-209ENST00000547018 ESRP2Q9H6T0 727 aaKnown RBP11.01□□□□□ -0.65
SCAF11-209ENST00000547018 NUPL2O15504 423 aaKnown RBP11□□□□□ -0.65
SCAF11-209ENST00000547018 GSTP1P09211 210 aaKnown RBP11□□□□□ -0.65
SCAF11-209ENST00000547018 OR5H8P0DN80 308 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 AKR1C2P52895 323 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 AKR1C1Q04828 323 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 PRDX4Q13162 271 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 IKZF1Q13422 519 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 ZNF529Q6P280 563 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 CRIP3Q6Q6R5 217 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 GSG1LQ6UXU4 331 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 OR10AD1Q8NGE0 317 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 THAP6Q8TBB0 222 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 VRK1Q99986 396 aaPredicted RBP11□□□□□ -0.65
SCAF11-209ENST00000547018 KALRNO60229 2985 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 USF3Q68DE3 2245 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 A0A0A6YYH2 397 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 A0A0B4J2A0 478 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 A6NJ64 397 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 SYNGR1O43759 233 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 RLN2P04090 185 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 PRF1P14222 555 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 BCL3P20749 454 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 APLNRP35414 380 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 MALLQ13021 153 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 ZNF528Q3MIS6 628 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 SIGIRRQ6IA17 410 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 CLEC18BQ6UXF7 455 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 ZSCAN4Q8NAM6 433 aaPredicted RBP11□□□□□ -0.65
SCAF11-209ENST00000547018 LOXL4Q96JB6 756 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 PARP12Q9H0J9 701 aaKnown RBP11□□□□□ -0.65
SCAF11-209ENST00000547018 SHPKQ9UHJ6 478 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 V9GYS6 101 aa11□□□□□ -0.65
SCAF11-209ENST00000547018 TTLL8A6PVC2 850 aa10.99□□□□□ -0.65
SCAF11-209ENST00000547018 CD74P04233 296 aa10.99□□□□□ -0.65
SCAF11-209ENST00000547018 OTX1P32242 354 aaPredicted RBP10.99□□□□□ -0.65
SCAF11-209ENST00000547018 ALKBH6Q3KRA9 238 aa10.99□□□□□ -0.65
SCAF11-209ENST00000547018 ABCA11PQ4W5N1 156 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms