RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 JSRP1Q96MG2 331 aaPredicted RBP12.42□□□□□ -0.42
SRP54-202ENST00000546080 BCO1Q9HAY6 547 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 NECAP2Q9NVZ3 263 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 A0A087WWC5 75 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 E9PLN8 166 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 HEXBP07686 556 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 CXCL1P09341 107 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 FASLGP48023 281 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 FBXW4P57775 412 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 FXYD4P59646 89 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 GNMTQ14749 295 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 UBE2V2Q15819 145 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 PHLDA2Q53GA4 152 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 SPNS3Q6ZMD2 512 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 OR2G3Q8NGZ4 309 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 PIGTQ969N2 578 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 NTNG2Q96CW9 530 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 MVB12AQ96EY5 273 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 C18orf12Q96KH6 178 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 LYZL4Q96KX0 146 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 RHOVQ96L33 236 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 PIGQQ9BRB3 760 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 LIME1Q9H400 295 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 PRDM13Q9H4Q3 707 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 NXT1Q9UKK6 140 aaKnown RBP12.42□□□□□ -0.42
SRP54-202ENST00000546080 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
SRP54-202ENST00000546080 C5orf63A6NC05 138 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 FAHP16930 419 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 ASCL1P50553 236 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 SUMO3P55854 103 aaPredicted RBP12.41□□□□□ -0.42
SRP54-202ENST00000546080 NKX6-1P78426 367 aaPredicted RBP12.41□□□□□ -0.42
SRP54-202ENST00000546080 CCL20P78556 96 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 EWSR1Q01844 656 aaKnown RBP eCLIP12.41□□□□□ -0.42
SRP54-202ENST00000546080 MYBPHQ13203 477 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 SLC25A47Q6Q0C1 308 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 LGI3Q8N145 548 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 LRTM2Q8N967 370 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 ZFP62Q8NB50 900 aaPredicted RBP12.41□□□□□ -0.42
SRP54-202ENST00000546080 OR5L1Q8NGL2 311 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 C14orf144Q96I85 54 aa12.41□□□□□ -0.42
SRP54-202ENST00000546080 LILRA5A6NI73 299 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 H0YL77 283 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HSD17B6O14756 317 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 PPP1R2P9O14990 202 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BKO60814 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 F10P00742 488 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BJP06899 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 CA3P07451 260 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 GLI4P10075 376 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.42
SRP54-202ENST00000546080 GABRG2P18507 467 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 KLK2P20151 261 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BOP23527 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BBP33778 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 SFTPDP35247 375 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 CSNK1A1P48729 337 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 RBP2P50120 134 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BDP58876 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 RND3P61587 244 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BCP62807 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 DLK1P80370 383 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 SMAD4Q13485 552 aaKnown RBP12.4□□□□□ -0.42
SRP54-202ENST00000546080 ZNF266Q14584 549 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST2H2BEQ16778 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.4□□□□□ -0.42
SRP54-202ENST00000546080 LANCL3Q6ZV70 420 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 SSX9Q7RTT3 188 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 OR8G5Q8NG78 346 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HAS2Q92819 552 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BHQ93079 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 ZDHHC12Q96GR4 267 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BNQ99877 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HIST1H2BMQ99879 126 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 ZNF700Q9H0M5 742 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 AK3Q9UIJ7 227 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 TDRD6O60522 2096 aaKnown RBP12.4□□□□□ -0.42
SRP54-202ENST00000546080 BTBD17A6NE02 478 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 MSTNO14793 375 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 CYB5BO43169 146 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 DHRS3O75911 302 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 ZNF205O95201 554 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 SRP19P09132 144 aaKnown RBP12.4□□□□□ -0.42
SRP54-202ENST00000546080 FOSL2P15408 326 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 ATP6V0CP27449 155 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 OPRM1P35372 400 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 RGS19P49795 217 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 RRADP55042 308 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 HAGHQ16775 308 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 PDZD11Q5EBL8 140 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 OR14L1PQ8NHC6 308 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 PP6455Q8WZ26 134 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 BOD1Q96IK1 185 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 Q96M66 194 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 FAAP24Q9BTP7 215 aa12.4□□□□□ -0.42
SRP54-202ENST00000546080 VN1R1Q9GZP7 353 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms