RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 OR4A8P0C604 315 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 OR5G3P0C626 314 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 HIST1H1CP16403 213 aaKnown RBP7.65□□□□□ -1.18
CLIP1-218ENST00000545889 NAAAQ02083 359 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 TLE1Q04724 770 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 PLXDC2Q6UX71 529 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 TSEN54Q7Z6J9 526 aaKnown RBP7.65□□□□□ -1.18
CLIP1-218ENST00000545889 CATSPERDQ86XM0 798 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 C20orf24Q9BUV8 137 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 NECAP2Q9NVZ3 263 aa7.65□□□□□ -1.18
CLIP1-218ENST00000545889 GABRPO00591 440 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 FOXS1O43638 330 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 ANGPTL7O43827 346 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 SCAF4O95104 1147 aaKnown RBP7.65□□□□□ -1.19
CLIP1-218ENST00000545889 OR10J4P0C629 311 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 CT45A10P0DMU9 189 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 GALNSP34059 522 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 MLLT11Q13015 90 aaPredicted RBP7.65□□□□□ -1.19
CLIP1-218ENST00000545889 PABPC1L2AQ5JQF8 200 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 NUFIP2Q7Z417 695 aaKnown RBP7.65□□□□□ -1.19
CLIP1-218ENST00000545889 HSD17B13Q7Z5P4 300 aaPredicted RBP7.65□□□□□ -1.19
CLIP1-218ENST00000545889 DUSP18Q8NEJ0 188 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 TEAD3Q99594 435 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 GPATCH2Q9NW75 528 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 NTMQ9P121 344 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 CLN8Q9UBY8 286 aa7.65□□□□□ -1.19
CLIP1-218ENST00000545889 hADV38S2A0JD32 116 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 HRKO00198 91 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SNRPBP14678 240 aaKnown RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 CDAP32320 146 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PRRX1P54821 245 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 GUCA2BQ16661 112 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF674Q2M3X9 581 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SLC23A3Q6PIS1 610 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SSX8Q7RTT4 187 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 OR10R2Q8NGX6 335 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 OR56B4Q8NH76 319 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ZG16BQ96DA0 208 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PDCD1LG2Q9BQ51 273 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 NXF2Q9GZY0 626 aaKnown RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ZCCHC4Q9H5U6 513 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SIRT5Q9NXA8 310 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 CCDC88CQ9P219 2028 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF729A6NN14 1252 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SLC2A10O95528 541 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PNLIPP16233 465 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SPI1P17947 270 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 GABRA5P31644 462 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SELENOPP49908 381 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 UBE2G2P60604 165 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 MFGE8Q08431 387 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 KIAA0141Q14154 515 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 HLXQ14774 488 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SSX1Q16384 188 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ST3GAL2Q16842 350 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ADGRE4PQ86SQ3 457 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF546Q86UE3 836 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 THNSL2Q86YJ6 484 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PLPP5Q8NEB5 264 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 OR2T6Q8NHC8 308 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SIGLEC11Q96RL6 698 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SMCO4Q9NRQ5 59 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 OBSL1O75147 1896 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PMP2P02689 132 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ATP1B1P05026 303 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SERPINF1P36955 418 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 GPX4P36969 197 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 EMDP50402 254 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 KCNIP4Q6PIL6 250 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ZNF561Q8N587 486 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 OR10D4PQ8NGN7 298 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 NUP210Q8TEM1 1887 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 MIXL1Q9H2W2 232 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 TMPRSS5Q9H3S3 457 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 C1RLQ9NZP8 487 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PILRAQ9UKJ1 303 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 CHD9Q3L8U1 2897 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 FAM221AA4D161 298 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SMAD7O15105 426 aaKnown RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 GLI4P10075 376 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ELK1P19419 428 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 CA6P23280 308 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 DUSP1P28562 367 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 UBE2MP61081 183 aaKnown RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 OR8G2PQ6IF36 304 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 MRM1Q6IN84 353 aaKnown RBP7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PRSS35Q8N3Z0 413 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SPICQ8N5J4 248 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 SUMF1Q8NBK3 374 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 TMEM104Q8NE00 496 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 NOXO1Q8NFA2 376 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 OR14K1Q8NGZ2 314 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 LRRC29Q8WV35 223 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 PHYHIPQ92561 330 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 ATG101Q9BSB4 218 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 WDR54Q9H977 334 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 BCL2L10Q9HD36 194 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 C1orf123Q9NWV4 160 aa7.64□□□□□ -1.19
CLIP1-218ENST00000545889 MEX3AA1L020 520 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms