RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 DSCAML1Q8TD84 2053 aa11.67□□□□□ -0.54
RTN3-214ENST00000545432 KRT36O76013 467 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 LYNP07948 512 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 PIPP12273 146 aaPredicted RBP11.66□□□□□ -0.54
RTN3-214ENST00000545432 HTR1DP28221 377 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 DYNC1I2Q13409 638 aaKnown RBP11.66□□□□□ -0.54
RTN3-214ENST00000545432 ZBTB49Q6ZSB9 765 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 ZNF573Q86YE8 665 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.66□□□□□ -0.54
RTN3-214ENST00000545432 EGFL6Q8IUX8 553 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 OR2T33Q8NG76 320 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 TFAP2CQ92754 450 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 ZNF714Q96N38 554 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 SLC25A33Q9BSK2 321 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 TMEM133Q9H2Q1 129 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 DPM3Q9P2X0 92 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 LYVE1Q9Y5Y7 322 aa11.66□□□□□ -0.54
RTN3-214ENST00000545432 STARD9Q9P2P6 4700 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 PQLC2LA1A4F0 135 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 M0QZK8 103 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 BRS3P32247 399 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 HAAOP46952 286 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 PSME3P61289 254 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 BDH1Q02338 343 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 RIPPLY1Q0D2K3 151 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 DMRTC1Q5HYR2 192 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 DEGS2Q6QHC5 323 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 C18orf65Q6ZTR6 163 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 MOB3CQ70IA8 216 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 OR8H2Q8N162 312 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 RNF148Q8N7C7 305 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 OR9Q2Q8NGE9 314 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 NDNFQ8TB73 568 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 CLEC7AQ9BXN2 247 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 FAM206AQ9NX38 181 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 SLC22A13Q9Y226 551 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 LINC00312Q9Y6C7 94 aa11.65□□□□□ -0.54
RTN3-214ENST00000545432 PSMB11A5LHX3 300 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 NXPH2O95156 264 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 IFNGP01579 166 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 FABP3P05413 133 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 ALOX5APP20292 161 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 CD24P25063 80 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 NUDT2P50583 147 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 Q6ZSR3 168 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 C8orf86Q6ZUL3 223 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 FAM81AQ8TBF8 368 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 SNX22Q96L94 193 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 ZNF649Q9BS31 505 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 DGCR6LQ9BY27 220 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 KRTAP17-1Q9BYP8 105 aa11.64□□□□□ -0.55
RTN3-214ENST00000545432 HYDINQ4G0P3 5121 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 hADV38S2A0JD32 116 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A18PA6NE21 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A16PA6NEW6 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A20PA6NIJ5 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A12PA8MX19 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A5PA8MXJ8 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 LY6LH3BQJ8 138 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 MMP23AO75900 390 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 DNAJC8O75937 253 aaPredicted RBP11.63□□□□□ -0.55
RTN3-214ENST00000545432 NRASP01111 189 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A15PP0C7V4 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A13PP0C7W8 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A14PP0C7W9 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FAM90A24PP0C7X0 464 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 ZNF3P17036 446 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 CD34P28906 385 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 IL24Q13007 206 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 KHDC1LQ5JSQ8 128 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 SAMD4BQ5PRF9 694 aaKnown RBP11.63□□□□□ -0.55
RTN3-214ENST00000545432 PLCXD3Q63HM9 321 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 PLBD1Q6P4A8 553 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 CD300LDQ6UXZ3 194 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 RTN4RL2Q86UN3 420 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 THNSL2Q86YJ6 484 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 ZNF676Q8N7Q3 588 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 THEM6Q8WUY1 208 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 MCUR1Q96AQ8 359 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 ASCL2Q99929 193 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 MED20Q9H944 212 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 SPAG4Q9NPE6 437 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 FGFR1OP2Q9NVK5 253 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 SCOCQ9UIL1 159 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 KLHDC2Q9Y2U9 406 aa11.63□□□□□ -0.55
RTN3-214ENST00000545432 TMEM82A0PJX8 343 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 SH2D7A6NKC9 451 aaPredicted RBP11.62□□□□□ -0.55
RTN3-214ENST00000545432 FAM183AA6NL82 134 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 RIIAD1A6NNX1 92 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 DLGAP1O14490 977 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 EDDM3BP56851 147 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 SF3A3Q12874 501 aaKnown RBP eCLIP11.62□□□□□ -0.55
RTN3-214ENST00000545432 ZNF684Q5T5D7 378 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 GDPD3Q7L5L3 318 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 Q8NFD4 153 aa11.62□□□□□ -0.55
RTN3-214ENST00000545432 CHPT1Q8WUD6 406 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms