RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 VSTM5A8MXK1 200 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 MPC2O95563 127 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 TTRP02766 147 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 OR5H8P0DN80 308 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 RFC3P40938 356 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 HIST1H3AP68431 136 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 MZT1Q08AG7 82 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 HNF4GQ14541 408 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 TEX30Q5JUR7 227 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 LINC00696Q6ZRV3 163 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 TIPARPQ7Z3E1 657 aaKnown RBP5.12□□□□□ -1.59
VPS50-220ENST00000544910 S100A7AQ86SG5 101 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 FGF11Q92914 225 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 C10orf35Q96D05 121 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 ZNF845Q96IR2 970 aaPredicted RBP5.12□□□□□ -1.59
VPS50-220ENST00000544910 VAMP8Q9BV40 100 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 ALX4Q9H161 411 aaPredicted RBP5.12□□□□□ -1.59
VPS50-220ENST00000544910 TMEM231Q9H6L2 316 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 G6PC2Q9NQR9 355 aa5.12□□□□□ -1.59
VPS50-220ENST00000544910 KIAA1549LQ6ZVL6 1849 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 IGKV3D-11A0A0A0MRZ8 115 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 NME2P1O60361 137 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 PGA4P0DJD7 388 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 PGA3P0DJD8 388 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 VSIG8P0DPA2 414 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 SLC25A4P12235 298 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZNF17P17021 662 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 KCNJ3P48549 501 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 MMP16P51512 607 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 COL19A1Q14993 1142 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 AADACL3Q5VUY0 350 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 Q7L0L9 218 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 AQP3Q92482 292 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 GNRHR2Q96P88 292 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 C12orf49Q9H741 205 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 WDR54Q9H977 334 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZNF391Q9UJN7 358 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 C5orf49A4QMS7 147 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 CEBPZOSA8MTT3 80 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 F6UZH7 168 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ADAM11O75078 769 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 GLRA1P23415 457 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 GCH1P30793 250 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 PKIAP61925 76 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 RAC1P63000 192 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 GUK1Q16774 197 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 DMRTC1Q5HYR2 192 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 FNDC7Q5VTL7 733 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZDHHC23Q8IYP9 409 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 BATF2Q8N1L9 274 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ADAD2Q8NCV1 583 aaKnown RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 TAAR9Q96RI9 348 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 USB1Q9BQ65 265 aaKnown RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 CHST6Q9GZX3 395 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 MED9Q9NWA0 146 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 SCN3AQ9NY46 2000 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 DOCK6Q96HP0 2047 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 A0A087X0M5 115 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 KIR2DS1A0A191URI9 304 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 A0A1B0GX30 115 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 CTXN2P0C2S0 81 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 FABP4P15090 132 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 HNF1AP20823 631 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 KIR2DS4P43632 304 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 TGFBR3Q03167 851 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZNF345Q14585 488 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 KIR2DS1Q14954 304 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 TMEM183BQ1AE95 376 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 GGNBP1Q5YKI7 109 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 TMEM182Q6ZP80 229 aaPredicted RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 GCNT2Q8N0V5 402 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 SDSLQ96GA7 329 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 KIRREL1Q96J84 757 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 SF3B5Q9BWJ5 86 aaKnown RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 ARV1Q9H2C2 271 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 OBP2BQ9NPH6 170 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 FAM206AQ9NX38 181 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 TRAPPC2LQ9UL33 140 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ST3GAL6Q9Y274 331 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 TMEM218A2RU14 115 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZFP92A6NM28 416 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZNF727A8MUV8 499 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 LINC01387J3KSC0 135 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 SOCS1O15524 211 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 LRP3O75074 770 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 TUSC2O75896 110 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 NXPH3O95157 252 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 CST2P09228 141 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 OMGP23515 440 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 DTYMKP23919 212 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 HNRNPA3P51991 378 aaKnown RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZP1P60852 638 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 Q5BKY6 102 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZNF774Q6NX45 483 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 LSRQ86X29 649 aaPredicted RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 OR11H4Q8NGC9 324 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ALKBH3Q96Q83 286 aaPredicted RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 RTL8AQ9BWD3 113 aa5.11□□□□□ -1.59
VPS50-220ENST00000544910 ZNF331Q9NQX6 463 aaPredicted RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 OSGIN2Q9Y236 505 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms